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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA385064" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA385064 · 21 ✖

analysis 1

  • diamond · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2956073 2956073 PRJNA385064_P_NODE_7783_length_162_cov_0.902655_g7658_i0 PRJNA385064 7783 162 0.902655 1.4623011 Bacteria 2 Bacteria Bacteria 95.5 6.88e-22   NR MBS1638289.1 1898104 g7658 i0 77.8 2.96296296296296 54 12 100 0 162 1 55 108 MBS1638289.1 cation transporter [Bacteroidota bacterium] diamond 480 95.5 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
26807315 26807315 PRJNA385064_P_NODE_7521_length_163_cov_0.894737_g7396_i0 PRJNA385064 7521 163 0.894737 1.45842131 Bacteria 2 Bacteria Bacteria 72.4 4.33e-13   NR MES2132048.1 1898104 g7396 i0 68.5 1.98773006134969 54 17 99.4 0 1 162 211 264 MES2132048.1 hypothetical protein [Bacteroidota bacterium] diamond 324 72.8 0.994505494505495 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
26916989 26916989 PRJNA385064_P_NODE_6742_length_166_cov_1.102564_g6617_i0 PRJNA385064 6742 166 1.102564 1.83025624 Taibaiella helva 2301235 Bacteria Bacteria 94.4 7.199999999999999e-24   NR WP_157976816.1 2301235 g6617 i0 81.8 1.98795180722892 55 10 99.4 0 165 1 13 67 WP_157976816.1 transposase, partial [Taibaiella helva] diamond 330 94.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Taibaiella Taibaiella helva
27675682 27675682 PRJNA385064_P_NODE_8204_length_161_cov_0.776786_g8079_i0 PRJNA385064 8204 161 0.776786 1.25062546 Chitinophaga pinensis 79329 Bacteria Bacteria 40 0.0364   NR WP_012792240.1 79329 g8079 i0 38.5 0.968944099378882 52 24 82 1 159 28 41 92 WP_012792240.1 DUF805 domain-containing protein [Chitinophaga pinensis] diamond 156 40 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Chitinophaga Chitinophaga pinensis
27833206 27833206 PRJNA385064_P_NODE_7264_length_164_cov_0.886957_g7139_i0 PRJNA385064 7264 164 0.886957 1.45460948 Chitinophaga sp. 1869181 Bacteria Bacteria 102 1.6499999999999995e-23   NR MBA4198633.1 1869181 g7139 i0 100 0.98780487804878 54 0 98.8 0 162 1 70 123 MBA4198633.1 peptide transporter [Chitinophaga sp.] diamond 162 102 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Chitinophaga Chitinophaga sp.
28134510 28134510 PRJNA385064_P_NODE_7505_length_163_cov_0.894737_g7380_i0 PRJNA385064 7505 163 0.894737 1.45842131 Weeksellaceae 2762318 Bacteria Bacteria 81.3 4.12e-18   NR WP_367174840.1 259322 g7380 i0 79.5 3.95705521472393 44 9 81 0 2 133 75 118 WP_367174840.1 hypothetical protein [uncultured Chryseobacterium sp.] diamond 645 81.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium uncultured Chryseobacterium sp.
28211929 28211929 PRJNA385064_P_NODE_7566_length_163_cov_0.894737_g7441_i0 PRJNA385064 7566 163 0.894737 1.45842131 Asinibacterium sp. OR53 925409 Bacteria Bacteria 103 6.529999999999999e-24   NR WP_026768212.1 925409 g7441 i0 98.1 0.993865030674847 54 1 99.4 0 162 1 63 116 WP_026768212.1 phosphoenolpyruvate carboxylase [Asinibacterium sp. OR53] diamond 162 103 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Asinibacterium Asinibacterium sp. OR53
28292059 28292059 PRJNA385064_P_NODE_7606_length_163_cov_0.894737_g7481_i0 PRJNA385064 7606 163 0.894737 1.45842131 Bacteroidota 976 Bacteria Bacteria 77.8 1.52e-15   NR MCZ8217462.1 2099675 g7481 i0 65.4 7.73006134969325 52 18 95.7 0 163 8 106 157 MCZ8217462.1 peptidoglycan editing factor PgeF [Cyclobacteriaceae bacterium] diamond 1260 77.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
29380415 29380415 PRJNA385064_P_NODE_6529_length_167_cov_0.864407_g6404_i0 PRJNA385064 6529 167 0.864407 1.44355969 Bacteroidota bacterium 1898104 Bacteria Bacteria 108 8.73e-26   NR MBS1637485.1 1898104 g6404 i0 94.5 1.97604790419162 55 3 98.8 0 2 166 311 365 MBS1637485.1 hypothetical protein [Bacteroidota bacterium] diamond 330 108 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
29411899 29411899 PRJNA385064_P_NODE_8169_length_161_cov_0.910714_g8044_i0 PRJNA385064 8169 161 0.910714 1.46624954 Sphingobacteriia bacterium 2035813 Bacteria Bacteria 114 3.34e-29   NR MBN8835986.1 2035813 g8044 i0 100 0.987577639751553 53 0 98.8 0 159 1 47 99 MBN8835986.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Sphingobacteriia bacterium] diamond 159 114 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia       Sphingobacteriia bacterium
30043506 30043506 PRJNA385064_P_NODE_7751_length_162_cov_0.902655_g7626_i0 PRJNA385064 7751 162 0.902655 1.4623011 Sphingobacteriales bacterium 5 2044944 Bacteria Bacteria 50.4 2.29e-6   NR OJW53658.1 1895841 g7626 i0 100 0.444444444444444 24 0 44.4 0 161 90 62 85 OJW53658.1 MAG: hypothetical protein BGO55_00830 [Sphingobacteriales bacterium 50-39] diamond 72 50.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium 50-39
30328474 30328474 PRJNA385064_P_NODE_7372_length_164_cov_0.886957_g7247_i0 PRJNA385064 7372 164 0.886957 1.45460948 Bacteroidia bacterium 2044936 Bacteria Bacteria 74.3 7.41e-14   NR HXB40048.1 2044936 g7247 i0 66.7 1.97560975609756 54 18 98.8 0 1 162 40 93 HXB40048.1 efflux RND transporter periplasmic adaptor subunit [Bacteroidia bacterium] diamond 324 74.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia       Bacteroidia bacterium
30565652 30565652 PRJNA385064_P_NODE_7813_length_162_cov_0.902655_g7688_i0 PRJNA385064 7813 162 0.902655 1.4623011 Chitinophagaceae 563835 Bacteria Bacteria 96.7 1.24e-21   NR HEU4610052.1 1869212 g7688 i0 90.6 73.7962962962963 53 5 98.1 0 161 3 168 220 HEU4610052.1 TonB-dependent receptor [Chitinophagaceae bacterium] diamond 11955 97.4 0.992813141683778 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31023070 31023070 PRJNA385064_P_NODE_8055_length_161_cov_0.910714_g7930_i0 PRJNA385064 8055 161 0.910714 1.46624954 Bacteroidota bacterium 1898104 Bacteria Bacteria 48.5 6.38e-5   NR MBA2611655.1 1898104 g7930 i0 80 1.11801242236025 30 6 55.9 0 161 72 141 170 MBA2611655.1 hypothetical protein [Bacteroidota bacterium] diamond 180 48.5 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
31497446 31497446 PRJNA385064_P_NODE_4276_length_209_cov_0.956250_g4151_i0 PRJNA385064 4276 209 0.95625 1.9985625 Capnocytophaga granulosa 45242 Bacteria Bacteria 149 1.32e-41   NR WP_276727488.1 45242 g4151 i0 97.1 0.990430622009569 69 2 99 0 209 3 136 204 WP_276727488.1 hypothetical protein [Capnocytophaga granulosa] diamond 207 149 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Capnocytophaga granulosa
31655244 31655244 PRJNA385064_P_NODE_7797_length_162_cov_0.902655_g7672_i0 PRJNA385064 7797 162 0.902655 1.4623011 Hydrobacter penzbergensis 1235997 Bacteria Bacteria 112 3.3200000000000005e-27   NR WP_092724037.1 1235997 g7672 i0 100 2 54 0 100 0 1 162 457 510 WP_092724037.1 2-oxoacid:acceptor oxidoreductase subunit alpha [Hydrobacter penzbergensis] diamond 324 112 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Hydrobacter Hydrobacter penzbergensis
31813569 31813569 PRJNA385064_P_NODE_7617_length_163_cov_0.894737_g7492_i0 PRJNA385064 7617 163 0.894737 1.45842131 Paramuribaculum sp. 2518501 Bacteria Bacteria 39.7 0.04   NR MDE6049553.1 2518501 g7492 i0 34.3 0.644171779141104 35 23 64.4 0 151 47 40 74 MDE6049553.1 hypothetical protein [Paramuribaculum sp.] diamond 105 39.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Paramuribaculum Paramuribaculum sp.
32066594 32066594 PRJNA385064_P_NODE_7898_length_162_cov_0.902655_g7773_i0 PRJNA385064 7898 162 0.902655 1.4623011 Cloacibacterium sp. 1913682 Bacteria Bacteria 110 1.37e-27   NR WP_414984517.1 1913682 g7773 i0 96.3 2 54 2 100 0 1 162 166 219 WP_414984517.1 cysteine synthase A [Cloacibacterium sp.] diamond 324 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium sp.
32256906 32256906 PRJNA385064_P_NODE_7498_length_163_cov_0.894737_g7373_i0 PRJNA385064 7498 163 0.894737 1.45842131 Pseudobacter ginsenosidimutans 661488 Bacteria Bacteria 110 3.47e-27   NR WP_130541928.1 661488 g7373 i0 94.4 0.993865030674847 54 3 99.4 0 163 2 40 93 WP_130541928.1 DUF1015 domain-containing protein [Pseudobacter ginsenosidimutans] diamond 162 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Pseudobacter Pseudobacter ginsenosidimutans
32635635 32635635 PRJNA385064_P_NODE_6840_length_166_cov_0.871795_g6715_i0 PRJNA385064 6840 166 0.871795 1.4471797 Riemerella sp. 2382126 Bacteria Bacteria 110 4.88e-28   NR RKW63781.1 2382126 g6715 i0 98.2 0.993975903614458 55 1 99.4 0 166 2 56 110 RKW63781.1 MAG: isoprenyl transferase [Riemerella sp.] diamond 165 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Riemerella Riemerella sp.
32652422 32652422 PRJNA385064_P_NODE_8140_length_161_cov_0.910714_g8015_i0 PRJNA385064 8140 161 0.910714 1.46624954 Chitinophagaceae 563835 Bacteria Bacteria 113 1.9100000000000003e-27   NR MBN8720733.1 669455 g8015 i0 100 2.96273291925466 53 0 98.8 0 1 159 1034 1086 MBN8720733.1 alpha-2-macroglobulin [Sediminibacterium magnilacihabitans] diamond 477 113 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium magnilacihabitans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;