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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA384462" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 15 ✖

bioproject 1

  • PRJNA384462 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11884025 11884025 PRJNA384462_S_NODE_9170_length_190_cov_1.007092_g9054_i0 PRJNA384462 9170 190 1.007092 1.9134748 Methanosarcinales archaeon 2250255 Archaea Archaea 114 7.58e-28   NR RYE83270.1 2250255 g9054 i0 90.2 2.92105263157895 61 6 96.3 0 3 185 378 438 RYE83270.1 MAG: hypothetical protein EOO65_04230, partial [Methanosarcinales archaeon] diamond 555 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
26632005 26632005 PRJNA384462_S_NODE_11581_length_174_cov_1.224000_g11465_i0 PRJNA384462 11581 174 1.224 2.12976 archaeon 1906665 Archaea Archaea 45.8 1.88e-4   NR RYY35050.1 1906665 g11465 i0 58.8 0.586206896551724 34 14 58.6 0 172 71 55 88 RYY35050.1 MAG: hypothetical protein EON62_02800 [archaeon] diamond 102 45.8 1 Archaea               archaeon
28211917 28211917 PRJNA384462_S_NODE_11786_length_173_cov_1.177419_g11670_i0 PRJNA384462 11786 173 1.177419 2.03693487 archaeon 1906665 Archaea Archaea 105 7.09e-28   NR RYH28873.1 1906665 g11670 i0 85.7 0.971098265895954 56 8 97.1 0 1 168 26 81 RYH28873.1 MAG: hypothetical protein EON65_10550 [archaeon] diamond 168 105 1 Archaea               archaeon
28464901 28464901 PRJNA384462_S_NODE_15506_length_161_cov_0.901786_g15390_i0 PRJNA384462 15506 161 0.901786 1.45187546 archaeon 1906665 Archaea Archaea 45.1 5.67e-4   NR RYY73917.1 1906665 g15390 i0 100 0.372670807453416 20 0 37.3 0 91 150 91 110 RYY73917.1 MAG: 50S ribosomal protein P1 [archaeon] diamond 60 45.1 1 Archaea               archaeon
28671216 28671216 PRJNA384462_S_NODE_9647_length_186_cov_1.116788_g9531_i0 PRJNA384462 9647 186 1.116788 2.07722568 Thermoplasmatota 2283796 Archaea Archaea 42.4 0.0211   NR DAC54348.1 2163009 g9531 i0 47.9 5.82258064516129 48 25 77.4 0 158 15 1 48 DAC54348.1 MAG TPA: 50S ribosomal protein L32e [Candidatus Poseidoniales archaeon] diamond 1083 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
28906588 28906588 PRJNA384462_S_NODE_1968_length_371_cov_1.254658_g1852_i0 PRJNA384462 1968 371 1.254658 4.65478118 Nitrososphaerales archaeon 2268197 Archaea Archaea 76.3 2.15e-13   NR HVB12067.1 2268197 g1852 i0 53.5 1.14824797843666 71 32 56.6 1 5 214 304 374 HVB12067.1 molecular chaperone DnaJ [Nitrososphaerales archaeon] diamond 426 76.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
29664196 29664196 PRJNA384462_S_NODE_5670_length_228_cov_1.139665_g5554_i0 PRJNA384462 5670 228 1.139665 2.5984362 archaeon 1906665 Archaea Archaea 65.9 5.02e-12   NR RYY35050.1 1906665 g5554 i0 46.3 3.43421052631579 67 33 86.8 2 226 29 24 88 RYY35050.1 MAG: hypothetical protein EON62_02800 [archaeon] diamond 783 65.9 1 Archaea               archaeon
29948857 29948857 PRJNA384462_S_NODE_9751_length_185_cov_1.500000_g9635_i0 PRJNA384462 9751 185 1.5 2.775 archaeon 1906665 Archaea Archaea 97.4 4.64e-25   NR RYY82745.1 1906665 g9635 i0 82.8 1.91351351351351 58 10 94.1 0 185 12 4 61 RYY82745.1 MAG: hypothetical protein EON63_12740 [archaeon] diamond 354 97.4 1 Archaea               archaeon
31054933 31054933 PRJNA384462_S_NODE_2255_length_348_cov_1.357860_g2139_i0 PRJNA384462 2255 348 1.35786 4.7253528 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 43.1 0.0433   NR MCK5604269.1 2026773 g2139 i0 30.8 0.78448275862069 91 49 78.4 2 345 73 28 104 MCK5604269.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 273 43.1 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
31086253 31086253 PRJNA384462_S_NODE_1315_length_455_cov_3.201970_g1199_i0 PRJNA384462 1315 455 3.20197 14.5689635 archaeon 1906665 Archaea Archaea 184 1.52e-54   NR RYG64822.1 1906665 g1199 i0 64.1 1.74065934065934 131 47 86.4 0 454 62 167 297 RYG64822.1 MAG: 3-hydroxybutyryl-CoA dehydrogenase [archaeon] diamond 792 184 1 Archaea               archaeon
31148987 31148987 PRJNA384462_S_NODE_7595_length_204_cov_0.987097_g7479_i0 PRJNA384462 7595 204 0.987097 2.01367788 Methanobacteriota archaeon 2026739 Archaea Archaea 109 1e-27   NR MAO54017.1 2026739 g7479 i0 76.1 3.73529411764706 67 16 98.5 0 202 2 142 208 MAO54017.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 762 109 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31433942 31433942 PRJNA384462_S_NODE_6916_length_211_cov_2.055556_g6800_i0 PRJNA384462 6916 211 2.055556 4.33722316 Methanopyrus 2319 Archaea Archaea 42.7 0.00273   NR WP_011019823.1 2319 g6800 i0 48 0.710900473933649 50 22 69.7 2 211 65 14 60 WP_011019823.1 MULTISPECIES: 30S ribosomal protein S27ae [Methanopyrus] diamond 150 42.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanopyri Methanopyrales Methanopyraceae Methanopyrus  
31845111 31845111 PRJNA384462_S_NODE_9937_length_184_cov_1.133333_g9821_i0 PRJNA384462 9937 184 1.133333 2.08533272 archaeon 1906665 Archaea Archaea 57.8 6.47e-9   NR RYH29413.1 1906665 g9821 i0 71.4 0.570652173913043 35 10 57.1 0 184 80 68 102 RYH29413.1 MAG: 60S ribosomal protein L22 [archaeon] diamond 105 57.8 1 Archaea               archaeon
32083561 32083561 PRJNA384462_S_NODE_13938_length_164_cov_1.330435_g13822_i0 PRJNA384462 13938 164 1.330435 2.1819134 Archaea 2157 Archaea Archaea 62 2.04e-9   NR MFL2951787.1 2670411 g13822 i0 56 2.72560975609756 50 22 91.5 0 160 11 2599 2648 MFL2951787.1 putative Ig domain-containing protein [Candidatus Thalassarchaeaceae archaeon] diamond 447 62 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
32604383 32604383 PRJNA384462_S_NODE_440_length_721_cov_3.142857_g361_i0 PRJNA384462 440 721 3.142857 22.65999897 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 48.5 0.0182   NR MBS3136408.1 2026803 g361 i0 37.3 0.345353675450763 83 46 34.1 3 504 259 171 248 MBS3136408.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 249 48.5 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;