RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA384462" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA384462 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29365787 29365787 PRJNA384462_S_NODE_9129_length_190_cov_1.439716_g9013_i0 PRJNA384462 9129 190 1.439716 2.7354604 Acytosteliales 2058181 Evosea other_Eukaryota 72.4 6.49e-13   NR XP_004351851.1 261658 g9013 i0 54.4 1.8 57 25 88.4 1 189 22 358 414 XP_004351851.1 protein phosphatase 2A regulatory subunit [Cavenderia fasciculata] diamond 342 72.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29617965 29617965 PRJNA384462_S_NODE_1710_length_399_cov_1.148571_g1594_i0 PRJNA384462 1710 399 1.148571 4.58279829 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 100 1.18e-21   NR XP_003286953.1 5786 g1594 i0 39.2 2.72932330827068 120 72 90.2 1 375 16 245 363 XP_003286953.1 uncharacterized protein DICPUDRAFT_150991 [Dictyostelium purpureum] diamond 1089 101 0.99009900990099 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30850310 30850310 PRJNA384462_S_NODE_14854_length_162_cov_1.300885_g14738_i0 PRJNA384462 14854 162 1.300885 2.1074337 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42 0.0242   NR XP_003291009.1 5786 g14738 i0 53.7 3.61111111111111 41 19 75.9 0 37 159 417 457 XP_003291009.1 uncharacterized protein DICPUDRAFT_155553 [Dictyostelium purpureum] diamond 585 42 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31655239 31655239 PRJNA384462_S_NODE_3017_length_299_cov_1.908000_g2901_i0 PRJNA384462 3017 299 1.908 5.70492 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 85.5 3.07e-18   NR XP_012753211.1 1410327 g2901 i0 51.5 0.993311036789298 99 48 99.3 0 298 2 15 113 XP_012753211.1 hypothetical protein SAMD00019534_073500 [Acytostelium subglobosum LB1] diamond 297 85.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
31750166 31750166 PRJNA384462_S_NODE_5577_length_229_cov_2.155556_g5461_i0 PRJNA384462 5577 229 2.155556 4.93622324 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 139 4.36e-36   NR KAH3766423.1 1580589 g5461 i0 86.7 1.96506550218341 75 10 98.3 0 3 227 717 791 KAH3766423.1 elongation factor 2 [Pelomyxa schiedti] diamond 450 139 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31876683 31876683 PRJNA384462_S_NODE_5377_length_233_cov_1.108696_g5261_i0 PRJNA384462 5377 233 1.108696 2.58326168 Dictyostelium purpureum 5786 Evosea other_Eukaryota 105 3.5399999999999995e-24   NR XP_003289648.1 5786 g5261 i0 62.5 2.76824034334764 72 27 92.7 0 13 228 489 560 XP_003289648.1 uncharacterized protein DICPUDRAFT_94960 [Dictyostelium purpureum] diamond 645 105 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32684063 32684063 PRJNA384462_S_NODE_11500_length_174_cov_2.040000_g11384_i0 PRJNA384462 11500 174 2.04 3.5496 root 1 Root_unresolved Root_unresolved 93.6 1.78e-20   NR PRP84882.1 1890364 g11384 i0 73.2 16.551724137931 56 15 96.6 0 173 6 459 514 PRP84882.1 hypothetical protein PROFUN_07536 [Planoprotostelium fungivorum] diamond 2880 93.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;