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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA384462" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA384462 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16982672 16982672 PRJNA384462_S_NODE_11334_length_175_cov_2.015873_g11218_i0 PRJNA384462 11334 175 2.015873 3.52777775 Eimeriidae 5799 SAR_Eukaryotes SAR_Eukaryotes 89.4 3.92e-19   NR XP_013251984.1 5801 g11218 i0 77.6 3.97714285714286 58 7 99.4 1 2 175 359 410 XP_013251984.1 acetyl-CoA acyltransferase B, putative [Eimeria acervulina] diamond 696 90.1 0.992230854605993 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
26680458 26680458 PRJNA384462_S_NODE_14741_length_162_cov_1.823009_g14625_i0 PRJNA384462 14741 162 1.823009 2.95327458 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 47 7.37e-5   NR XP_003881803.1 572307 g14625 i0 55.8 1.59259259259259 43 19 79.6 0 161 33 52 94 XP_003881803.1 60S ribosomal protein L36, related [Neospora caninum Liverpool] diamond 258 47.4 0.991561181434599 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
29191066 29191066 PRJNA384462_S_NODE_11189_length_176_cov_1.598425_g11073_i0 PRJNA384462 11189 176 1.598425 2.813228 Plasmodium malariae 5858 SAR_Eukaryotes SAR_Eukaryotes 42 0.0293   NR XP_028860088.1 5858 g11073 i0 45.5 1.5 44 22 75 1 25 156 719 760 XP_028860088.1 conserved Plasmodium protein, unknown function [Plasmodium malariae] diamond 264 42 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
29980418 29980418 PRJNA384462_S_NODE_9771_length_185_cov_1.345588_g9655_i0 PRJNA384462 9771 185 1.345588 2.4893378 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 64.3 1.48e-10   NR UVC54537.1 68886 g9655 i0 52.5 2.87027027027027 59 28 95.7 0 181 5 153 211 UVC54537.1 60S ribosomal L1/L10a protein [Theileria orientalis] diamond 531 64.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
30060316 30060316 PRJNA384462_S_NODE_7931_length_200_cov_2.337748_g7815_i0 PRJNA384462 7931 200 2.337748 4.675496 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.3 1.28e-6   NR AET50831.1 5802 g7815 i0 43.1 2.64 58 31 87 1 1 174 22 77 AET50831.1 hypothetical protein [Eimeria tenella] diamond 528 54.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
30502862 30502862 PRJNA384462_S_NODE_16313_length_151_cov_2.401961_g16197_i0 PRJNA384462 16313 151 2.401961 3.62696111 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.8 8.82e-10   NR XP_029219060.1 94643 g16197 i0 58 2.88079470198675 50 20 99.3 1 150 1 140 188 XP_029219060.1 ribosomal protein RPL3 [Besnoitia besnoiti] diamond 435 63.2 0.993670886075949 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
30565650 30565650 PRJNA384462_S_NODE_12413_length_169_cov_1.266667_g12297_i0 PRJNA384462 12413 169 1.266667 2.14066723 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 4.01e-6   NR XP_016654697.1 31271 g12297 i0 47.5 2.0414201183432 59 28 99.4 2 169 2 298 356 XP_016654697.1 chaperone binding protein, putative [Plasmodium chabaudi chabaudi] diamond 345 53.1 0.994350282485876 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
31180680 31180680 PRJNA384462_S_NODE_8775_length_193_cov_1.062500_g8659_i0 PRJNA384462 8775 193 1.0625 2.050625 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 102 6.11e-24   NR XP_067197041.1 515981 g8659 i0 78.1 0.994818652849741 64 14 99.5 0 193 2 322 385 XP_067197041.1 uncharacterized protein FG386_000852 [Cryptosporidium ryanae] diamond 192 102 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
32446620 32446620 PRJNA384462_S_NODE_2259_length_347_cov_2.395973_g2143_i0 PRJNA384462 2259 347 2.395973 8.31402631 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 59.3 6.97e-8   NR CEL69710.1 572307 g2143 i0 56.4 2.38616714697406 55 22 47.6 1 336 172 153 205 CEL69710.1 TPA: adenylyl cyclase associated protein, putative [Neospora caninum Liverpool] diamond 828 59.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
32478221 32478221 PRJNA384462_S_NODE_7779_length_202_cov_1.137255_g7663_i0 PRJNA384462 7779 202 1.137255 2.2972551 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00134   NR XP_013440820.1 51315 g7663 i0 48 0.742574257425743 50 25 74.3 1 192 43 176 224 XP_013440820.1 cyclin, N-terminal domain-containing protein, putative [Eimeria necatrix] diamond 150 46.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
32747172 32747172 PRJNA384462_S_NODE_16160_length_153_cov_2.211538_g16044_i0 PRJNA384462 16160 153 2.211538 3.38365314 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 46.6 4.68e-4   NR XP_067715188.1 5871 g16044 i0 82.1 5.88235294117647 28 5 54.9 0 66 149 34 61 XP_067715188.1 polyadenylate-binding protein [Babesia caballi] diamond 900 46.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;