RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA384462" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA384462 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27675678 27675678 PRJNA384462_S_NODE_6604_length_215_cov_0.921687_g6488_i0 PRJNA384462 6604 215 0.921687 1.98162705 Deinococcus carri 1211323 Bacteria Bacteria 76.3 2.19e-14   NR WP_345460703.1 1211323 g6488 i0 55.9 1.91162790697674 68 29 93.5 1 213 13 234 301 WP_345460703.1 leishmanolysin-related zinc metalloendopeptidase [Deinococcus carri] diamond 411 76.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus carri
30517507 30517507 PRJNA384462_S_NODE_9293_length_189_cov_1.035714_g9177_i0 PRJNA384462 9293 189 1.035714 1.95749946 Trueperaceae bacterium 2026798 Bacteria Bacteria 54.7 1.08e-6   NR MFO8149087.1 2026798 g9177 i0 45.8 1.77777777777778 59 25 93.7 1 6 182 411 462 MFO8149087.1 sulfate permease [Trueperaceae bacterium] diamond 336 54.7 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;