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contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA383995" and tax_kingdom = "Bacillati"

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tax_phylum 3

tax_superkingdom 1

tax_kingdom 1

  • Bacillati · 36 ✖

bioproject 1

  • PRJNA383995 · 36 ✖

analysis 1

  • diamond · 36 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6782968 6782968 PRJNA383995_P_NODE_17706_length_163_cov_0.894737_g17607_i0 PRJNA383995 17706 163 0.894737 1.45842131 Streptococcus thermophilus 1308 Bacteria Bacteria 112 5.08e-27   NR TKW62483.1 1308 g17607 i0 100 1.98773006134969 54 0 99.4 0 1 162 550 603 TKW62483.1 MAG: hypothetical protein DI612_08705, partial [Streptococcus thermophilus] diamond 324 112 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus thermophilus
9333357 9333357 PRJNA383995_P_NODE_4608_length_291_cov_1.243802_g4509_i0 PRJNA383995 4608 291 1.243802 3.61946382 Microbacterium algeriense 2615184 Bacteria Bacteria 206 5.16e-60   NR WP_151459785.1 2615184 g4509 i0 100 0.989690721649485 96 0 99 0 290 3 58 153 WP_151459785.1 NPCBM/NEW2 domain-containing protein [Microbacterium algeriense] diamond 288 206 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium algeriense
26948488 26948488 PRJNA383995_P_NODE_16142_length_166_cov_0.871795_g16043_i0 PRJNA383995 16142 166 0.871795 1.4471797 Microbacterium suwonense 683047 Bacteria Bacteria 94.7 3.62e-21   NR WP_286299404.1 683047 g16043 i0 83.6 1.98795180722892 55 9 99.4 0 1 165 183 237 WP_286299404.1 ATP-binding protein [Microbacterium suwonense] diamond 330 94.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium suwonense
26980163 26980163 PRJNA383995_P_NODE_12502_length_186_cov_1.116788_g12403_i0 PRJNA383995 12502 186 1.116788 2.07722568 Microbacterium sp. Mcb1 51671 Bacteria Bacteria 116 1.63e-29   NR WP_262001983.1 2926012 g12403 i0 95.1 0.983870967741935 61 3 98.4 0 2 184 256 316 WP_262001983.1 XRE family transcriptional regulator [Microbacterium sp. Mcb102] diamond 183 116 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. Mcb102
27137919 27137919 PRJNA383995_P_NODE_16622_length_165_cov_0.879310_g16523_i0 PRJNA383995 16622 165 0.87931 1.4508615 Levyella massiliensis 938289 Bacteria Bacteria 112 2.9e-28   NR WP_019190309.1 938289 g16523 i0 96.3 0.981818181818182 54 2 98.2 0 3 164 116 169 WP_019190309.1 MaoC/PaaZ C-terminal domain-containing protein [Levyella massiliensis] diamond 162 112 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales   Levyella Levyella massiliensis
27169742 27169742 PRJNA383995_P_NODE_11242_length_196_cov_1.047619_g11143_i0 PRJNA383995 11242 196 1.047619 2.05333324 Microthrixaceae bacterium 2497627 Bacteria Bacteria 41.6 0.0493   NR MCB1266670.1 2497627 g11143 i0 42 1.53061224489796 50 29 76.5 0 189 40 83 132 MCB1266670.1 hypothetical protein [Microthrixaceae bacterium] diamond 300 41.6 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales Microthrixaceae   Microthrixaceae bacterium
27707411 27707411 PRJNA383995_P_NODE_15484_length_167_cov_0.864407_g15385_i0 PRJNA383995 15484 167 0.864407 1.44355969 Microbacterium oxydans 82380 Bacteria Bacteria 71.6 2.86e-13   NR WP_371861860.1 82380 g15385 i0 72 0.898203592814371 50 13 88 1 147 1 1 50 WP_371861860.1 ATP-binding protein [Microbacterium oxydans] diamond 150 71.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium oxydans
28054196 28054196 PRJNA383995_P_NODE_18465_length_162_cov_0.902655_g18366_i0 PRJNA383995 18465 162 0.902655 1.4623011 Microbacterium maritypicum 33918 Bacteria Bacteria 104 1.74e-24   NR WP_141385741.1 33918 g18366 i0 87 2.98148148148148 54 7 100 0 1 162 396 449 WP_141385741.1 zinc-ribbon domain-containing protein [Microbacterium maritypicum] diamond 483 104 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium maritypicum
28085782 28085782 PRJNA383995_P_NODE_17645_length_163_cov_0.894737_g17546_i0 PRJNA383995 17645 163 0.894737 1.45842131 Mediannikoviicoccus vaginalis 2899727 Bacteria Bacteria 92.4 3.82e-20   NR WP_237036350.1 2899727 g17546 i0 92.5 0.975460122699387 53 4 97.5 0 3 161 801 853 WP_237036350.1 DNA mismatch repair protein MutS [Mediannikoviicoccus vaginalis] diamond 159 92.4 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Mediannikoviicoccus Mediannikoviicoccus vaginalis
28369980 28369980 PRJNA383995_P_NODE_14846_length_170_cov_1.264463_g14747_i0 PRJNA383995 14846 170 1.264463 2.1495871 Microbacterium maritypicum 33918 Bacteria Bacteria 105 6.09e-26   NR WP_141385734.1 33918 g14747 i0 94.6 0.988235294117647 56 3 98.8 0 1 168 83 138 WP_141385734.1 FAD-dependent thymidylate synthase [Microbacterium maritypicum] diamond 168 105 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium maritypicum
28401621 28401621 PRJNA383995_P_NODE_18846_length_161_cov_0.910714_g18747_i0 PRJNA383995 18846 161 0.910714 1.46624954 Actinomycetota bacterium 2900548 Bacteria Bacteria 54.3 3.08e-7   NR MSW51030.1 2900548 g18747 i0 46.2 0.968944099378882 52 28 96.9 0 4 159 71 122 MSW51030.1 GNAT family N-acetyltransferase [Actinomycetota bacterium] diamond 156 54.3 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
28433236 28433236 PRJNA383995_P_NODE_6986_length_242_cov_1.191710_g6887_i0 PRJNA383995 6986 242 1.19171 2.8839382 Microbacterium sp. KKR3/1 2904241 Bacteria Bacteria 148 2.8299999999999993e-42   NR WP_232761915.1 2904241 g6887 i0 81.4 1.06611570247934 86 10 99.2 1 2 241 87 172 WP_232761915.1 bifunctional DNA primase/polymerase [Microbacterium sp. KKR3/1] diamond 258 148 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. KKR3/1
28622782 28622782 PRJNA383995_P_NODE_12367_length_187_cov_1.108696_g12268_i0 PRJNA383995 12367 187 1.108696 2.07326152 Microbacterium sp. UBA837 1946956 Bacteria Bacteria 116 1.68e-28   NR WP_292729136.1 1946956 g12268 i0 90 0.962566844919786 60 6 96.3 0 181 2 1 60 WP_292729136.1 integrase [Microbacterium sp. UBA837] diamond 180 116 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. UBA837
28686007 28686007 PRJNA383995_P_NODE_16987_length_164_cov_0.939130_g16888_i0 PRJNA383995 16987 164 0.93913 1.5401732 Clostridiales bacterium 1898207 Bacteria Bacteria 43.1 0.00941   NR NLE68665.1 1898207 g16888 i0 51.4 0.676829268292683 37 15 67.7 1 3 113 97 130 NLE68665.1 hypothetical protein [Clostridiales bacterium] diamond 111 43.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
28686008 28686008 PRJNA383995_P_NODE_6527_length_249_cov_1.265000_g6428_i0 PRJNA383995 6527 249 1.265 3.14985 Actinomycetota bacterium 2900548 Bacteria Bacteria 136 2.91e-35   NR MSW52987.1 2900548 g6428 i0 82.7 0.975903614457831 81 14 97.6 0 3 245 338 418 MSW52987.1 ubiquitin-activating enzyme [Actinomycetota bacterium] diamond 243 136 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
28811735 28811735 PRJNA383995_P_NODE_10208_length_205_cov_1.166667_g10109_i0 PRJNA383995 10208 205 1.166667 2.39166735 Microbacterium oxydans 82380 Bacteria Bacteria 140 1.29e-37   NR WP_151485322.1 82380 g10109 i0 94.1 1.99024390243902 68 4 99.5 0 204 1 30 97 WP_151485322.1 recombinase family protein [Microbacterium oxydans] diamond 408 140 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium oxydans
29253884 29253884 PRJNA383995_P_NODE_4169_length_304_cov_1.337255_g4070_i0 PRJNA383995 4169 304 1.337255 4.0652552 Thermoleophilaceae bacterium 2732252 Bacteria Bacteria 41.2 0.0491   NR HVD57385.1 2732252 g4070 i0 45.9 0.365131578947368 37 20 36.5 0 72 182 15 51 HVD57385.1 SHOCT domain-containing protein [Thermoleophilaceae bacterium] diamond 111 41.2 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Thermoleophilales Thermoleophilaceae   Thermoleophilaceae bacterium
29365782 29365782 PRJNA383995_P_NODE_12129_length_189_cov_0.928571_g12030_i0 PRJNA383995 12129 189 0.928571 1.75499919 Microbacterium 33882 Bacteria Bacteria 112 3.44e-30   NR WP_147805346.1 322686 g12030 i0 98.4 2.95238095238095 62 1 98.4 0 187 2 26 87 WP_147805346.1 hypothetical protein [Microbacterium sp. R1] diamond 558 112 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. R1
30012129 30012129 PRJNA383995_P_NODE_13051_length_182_cov_1.533835_g12952_i0 PRJNA383995 13051 182 1.533835 2.7915797 Kitasatospora saccharophila 407973 Bacteria Bacteria 42.4 0.0193   NR WP_380276580.1 407973 g12952 i0 42.6 0.89010989010989 54 25 79.1 3 181 38 40 93 WP_380276580.1 haloacid dehalogenase-like hydrolase [Kitasatospora saccharophila] diamond 162 42.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Kitasatospora Kitasatospora saccharophila
30043496 30043496 PRJNA383995_P_NODE_16251_length_166_cov_0.871795_g16152_i0 PRJNA383995 16251 166 0.871795 1.4471797 Microbacterium algeriense 2615184 Bacteria Bacteria 111 7.260000000000001e-27   NR WP_319031288.1 2615184 g16152 i0 98.2 0.993975903614458 55 1 99.4 0 165 1 1510 1564 WP_319031288.1 DUF7507 domain-containing protein [Microbacterium algeriense] diamond 165 111 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium algeriense
30137992 30137992 PRJNA383995_P_NODE_6992_length_242_cov_1.056995_g6893_i0 PRJNA383995 6992 242 1.056995 2.5579279 Microbacterium oxydans 82380 Bacteria Bacteria 82 1.94e-16   NR WP_378877396.1 82380 g6893 i0 100 0.471074380165289 38 0 47.1 0 242 129 266 303 WP_378877396.1 hypothetical protein [Microbacterium oxydans] diamond 114 82 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium oxydans
30282037 30282037 PRJNA383995_P_NODE_17892_length_163_cov_0.894737_g17793_i0 PRJNA383995 17892 163 0.894737 1.45842131 Bacteria 2 Bacteria Bacteria 106 7.45e-28   NR MBN9993869.1 1639 g17793 i0 100 3.97546012269939 54 0 99.4 0 163 2 28 81 MBN9993869.1 hypothetical protein [Listeria monocytogenes] diamond 648 106 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes
30423089 30423089 PRJNA383995_P_NODE_17193_length_164_cov_0.886957_g17094_i0 PRJNA383995 17193 164 0.886957 1.45460948 Microbacterium oleivorans 273677 Bacteria Bacteria 73.6 4.66e-14   NR WP_251577210.1 273677 g17094 i0 71.7 1.82926829268293 46 13 84.1 0 2 139 176 221 WP_251577210.1 peptidase E [Microbacterium oleivorans] diamond 300 73.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium oleivorans
30439808 30439808 PRJNA383995_P_NODE_18373_length_162_cov_0.902655_g18274_i0 PRJNA383995 18373 162 0.902655 1.4623011 Peptoniphilus 162289 Bacteria Bacteria 109 7e-27   NR WP_316714872.1 1175452 g18274 i0 100 1.96296296296296 53 0 98.1 0 3 161 305 357 WP_316714872.1 Na+/H+ antiporter NhaC family protein, partial [Peptoniphilus rhinitidis] diamond 318 109 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus rhinitidis
30485955 30485955 PRJNA383995_P_NODE_15633_length_167_cov_0.864407_g15534_i0 PRJNA383995 15633 167 0.864407 1.44355969 Chloroflexia bacterium 2448782 Bacteria Bacteria 107 2.65e-25   NR MBA3275463.1 2448782 g15534 i0 94.5 6.89820359281437 55 3 98.8 0 166 2 265 319 MBA3275463.1 succinate dehydrogenase flavoprotein subunit [Chloroflexia bacterium] diamond 1152 107 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
30643720 30643720 PRJNA383995_P_NODE_10853_length_199_cov_1.020000_g10754_i0 PRJNA383995 10853 199 1.02 2.0298 Citricoccus parietis 592307 Bacteria Bacteria 57.8 3.22e-9   NR MFB9075588.1 592307 g10754 i0 56.4 0.829145728643216 55 23 81.4 1 6 167 1 55 MFB9075588.1 hypothetical protein [Citricoccus parietis] diamond 165 57.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Citricoccus Citricoccus parietis
31212175 31212175 PRJNA383995_P_NODE_11975_length_190_cov_1.085106_g11876_i0 PRJNA383995 11975 190 1.085106 2.0617014 Microbacterium terricola 344163 Bacteria Bacteria 72.4 1.24e-13   NR WP_263797845.1 344163 g11876 i0 74.5 0.742105263157895 47 12 74.2 0 189 49 95 141 WP_263797845.1 DUF5343 domain-containing protein [Microbacterium terricola] diamond 141 72.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium terricola
31451032 31451032 PRJNA383995_P_NODE_13956_length_176_cov_1.204724_g13857_i0 PRJNA383995 13956 176 1.204724 2.12031424 Microbacterium 33882 Bacteria Bacteria 62 7.38e-10   NR WP_204938144.1 67574 g13857 i0 73.2 4.17613636363636 41 9 69.9 1 47 169 147 185 WP_204938144.1 acyl-CoA desaturase [Microbacterium keratanolyticum] diamond 735 62.4 0.993589743589744 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium keratanolyticum
31592329 31592329 PRJNA383995_P_NODE_13516_length_179_cov_1.176923_g13417_i0 PRJNA383995 13516 179 1.176923 2.10669217 Microbacterium oxydans 82380 Bacteria Bacteria 122 1.0599999999999999e-34   NR WP_141369814.1 82380 g13417 i0 96.6 0.988826815642458 59 2 98.9 0 1 177 30 88 WP_141369814.1 hypothetical protein [Microbacterium oxydans] diamond 177 122 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium oxydans
32003441 32003441 PRJNA383995_P_NODE_18938_length_161_cov_0.910714_g18839_i0 PRJNA383995 18938 161 0.910714 1.46624954 Microbacterium algeriense 2615184 Bacteria Bacteria 99.8 1.49e-23   NR WP_151458817.1 2615184 g18839 i0 98.1 0.987577639751553 53 1 98.8 0 3 161 73 125 WP_151458817.1 hypothetical protein [Microbacterium algeriense] diamond 159 99.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium algeriense
32066581 32066581 PRJNA383995_P_NODE_7598_length_233_cov_1.385870_g7499_i0 PRJNA383995 7598 233 1.38587 3.2290771 Microbacterium algeriense 2615184 Bacteria Bacteria 147 2.63e-43   NR WP_270366854.1 2615184 g7499 i0 98.7 0.978540772532189 76 1 97.9 0 233 6 87 162 WP_270366854.1 hypothetical protein [Microbacterium algeriense] diamond 228 147 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium algeriense
32146923 32146923 PRJNA383995_P_NODE_2618_length_378_cov_1.586626_g2519_i0 PRJNA383995 2618 378 1.586626 5.99744628 Bacillati 1783272 Bacteria Bacteria 43.5 0.041   NR HUT20065.1 2052143 g2519 i0 31 1.35714285714286 84 52 61.9 2 85 318 1 84 HUT20065.1 hypothetical protein [Anaerolineae bacterium] diamond 513 43.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32256891 32256891 PRJNA383995_P_NODE_12938_length_183_cov_1.141791_g12839_i0 PRJNA383995 12938 183 1.141791 2.08947753 Microbacterium sp. NPDC 51671 Bacteria Bacteria 88.6 2.61e-20   NR WP_401074224.1 3364198 g12839 i0 81.7 0.983606557377049 60 11 98.4 0 181 2 69 128 WP_401074224.1 hypothetical protein [Microbacterium sp. NPDC089695] diamond 180 88.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. NPDC089695
32431737 32431737 PRJNA383995_P_NODE_16479_length_165_cov_0.879310_g16380_i0 PRJNA383995 16479 165 0.87931 1.4508615 Actinomycetes 1760 Bacteria Bacteria 70.1 2.86e-12   NR WP_324241028.1 60912 g16380 i0 70.5 5.23636363636364 44 13 80 0 163 32 597 640 WP_324241028.1 ABC transporter ATP-binding protein [Pseudonocardia sp.] diamond 864 70.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Pseudonocardia Pseudonocardia sp.
32446614 32446614 PRJNA383995_P_NODE_5199_length_276_cov_0.854626_g5100_i0 PRJNA383995 5199 276 0.854626 2.35876776 Microbacteriaceae bacterium 1873462 Bacteria Bacteria 176 2.11e-50   NR HWL59759.1 1873462 g5100 i0 87 3 92 12 100 0 1 276 242 333 HWL59759.1 recombinase family protein [Microbacteriaceae bacterium] diamond 828 176 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae   Microbacteriaceae bacterium
32573153 32573153 PRJNA383995_P_NODE_12759_length_184_cov_1.451852_g12660_i0 PRJNA383995 12759 184 1.451852 2.67140768 Microbacterium sp. TS-1 1344956 Bacteria Bacteria 58.5 4.58e-8   NR WP_023953597.1 1344956 g12660 i0 52.6 0.929347826086957 57 21 92.9 2 1 171 262 312 WP_023953597.1 glycoside hydrolase family 2 protein [Microbacterium sp. TS-1] diamond 171 58.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. TS-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;