RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA382558" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA382558 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28149122 28149122 PRJNA382558_S_NODE_3785_length_228_cov_4.612565_g3781_i0 PRJNA382558 3785 228 4.612565 10.5166482 Caulobacter phage CcrPW 2283271 Viruses Viruses 55.8 4.28e-7   NR YP_009809422.1 2283271 g3781 i0 46.2 1.51315789473684 52 28 68.4 0 36 191 159 210 YP_009809422.1 hypothetical protein HOU00_gp333 [Caulobacter phage CcrPW] diamond 345 55.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Jeanschmidtviridae Colossusvirus Colossusvirus PW
31718679 31718679 PRJNA382558_S_NODE_4797_length_214_cov_6.175141_g4793_i0 PRJNA382558 4797 214 6.175141 13.21480174 Caudoviricetes sp. 2832643 Viruses Viruses 64.3 1.28e-10   NR DAU40274.1 2832643 g4793 i0 51.9 0.757009345794392 54 26 75.7 0 6 167 130 183 DAU40274.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 162 64.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;