RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA382558" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA382558 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29001908 29001908 PRJNA382558_S_NODE_11668_length_165_cov_5.343750_g11664_i0 PRJNA382558 11668 165 5.34375 8.8171875 Lithohypha guttulata 1690604 Fungi Fungi 50.8 7.29e-6   NR KAK5104716.1 1690604 g11664 i0 53.3 0.818181818181818 45 21 81.8 0 165 31 76 120 KAK5104716.1 hypothetical protein LTS08_002608 [Lithohypha guttulata] diamond 135 50.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Lithohypha Lithohypha guttulata
30864965 30864965 PRJNA382558_S_NODE_7094_length_191_cov_7.012987_g7090_i0 PRJNA382558 7094 191 7.012987 13.39480517 Hypomontagnella submonticulosa 152308 Fungi Fungi 41.6 0.0476   NR KAI2634769.1 152308 g7090 i0 44.2 0.675392670157068 43 24 67.5 0 160 32 190 232 KAI2634769.1 P-loop containing nucleoside triphosphate hydrolase protein [Hypomontagnella submonticulosa] diamond 129 41.6 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Hypoxylaceae Hypomontagnella Hypomontagnella submonticulosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;