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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA382357" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382357 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
403627 403627 PRJNA382357_P_NODE_32961_length_395_cov_2.008982_g32222_i0 PRJNA382357 32961 395 2.008982 7.9354789 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 91.3 2.17e-21   NR MEX1281900.1 2044940 g32222 i0 73.7 2.51392405063291 57 15 43.3 0 395 225 10 66 MEX1281900.1 type II toxin-antitoxin system HicA family toxin [Desulfobacterales bacterium] diamond 993 91.7 0.995637949836423 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
26726517 26726517 PRJNA382357_P_NODE_44941_length_344_cov_3.717314_g44202_i0 PRJNA382357 44941 344 3.717314 12.78756016 Geoalkalibacter sp. 3041440 Bacteria Bacteria 79 2.4e-14   NR WP_305042379.1 3041440 g44202 i0 70.8 0.837209302325581 48 14 41.9 0 3 146 707 754 WP_305042379.1 hypothetical protein [Geoalkalibacter sp.] diamond 288 79 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geoalkalibacteraceae Geoalkalibacter Geoalkalibacter sp.
26853751 26853751 PRJNA382357_P_NODE_105601_length_236_cov_2.228571_g104862_i0 PRJNA382357 105601 236 2.228571 5.25942756 Desulfosalsimonadaceae bacterium 3060584 Bacteria Bacteria 60.5 8.23e-10   NR MDO9262657.1 3060584 g104862 i0 82.8 0.73728813559322 29 5 36.9 0 1 87 52 80 MDO9262657.1 BrnT family toxin [Desulfosalsimonadaceae bacterium] diamond 174 60.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosalsimonadaceae   Desulfosalsimonadaceae bacterium
26948362 26948362 PRJNA382357_P_NODE_110002_length_232_cov_1.654971_g109263_i0 PRJNA382357 110002 232 1.654971 3.83953272 Smithella sp. 2053614 Bacteria Bacteria 84.7 3.98e-17   NR MEN6375517.1 2053614 g109263 i0 70.6 1.33189655172414 51 15 65.9 0 2 154 154 204 MEN6375517.1 DNA methyltransferase [Smithella sp.] diamond 309 84.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Smithellaceae Smithella Smithella sp.
28149033 28149033 PRJNA382357_P_NODE_127565_length_216_cov_2.806452_g126826_i0 PRJNA382357 127565 216 2.806452 6.06193632 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 88.2 7.3e-20   NR MEF8822686.1 2683721 g126826 i0 90.5 1.16666666666667 42 4 58.3 0 216 91 49 90 MEF8822686.1 3D domain-containing protein [Desulfohalobiaceae bacterium] diamond 252 88.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
28338429 28338429 PRJNA382357_P_NODE_35706_length_381_cov_1.621875_g34967_i0 PRJNA382357 35706 381 1.621875 6.17934375 Desulfobacterales bacterium 2044940 Bacteria Bacteria 92 4.26e-19   NR UCG05788.1 2044940 g34967 i0 35.8 1.90551181102362 120 76 94.5 1 21 380 206 324 UCG05788.1 MAG: serpin family protein [Desulfobacterales bacterium] diamond 726 92 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
28496354 28496354 PRJNA382357_P_NODE_123567_length_220_cov_1.238994_g122828_i0 PRJNA382357 123567 220 1.238994 2.7257868 Syntrophorhabdaceae bacterium 2660714 Bacteria Bacteria 48.1 1.4e-4   NR MCK9226613.1 2660714 g122828 i0 64.1 0.531818181818182 39 14 53.2 0 125 9 70 108 MCK9226613.1 hypothetical protein [Syntrophorhabdaceae bacterium] diamond 117 48.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae   Syntrophorhabdaceae bacterium
28875092 28875092 PRJNA382357_P_NODE_140488_length_208_cov_2.653061_g139749_i0 PRJNA382357 140488 208 2.653061 5.51836688 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 84 8.21e-19   NR MEF8941717.1 2683721 g139749 i0 91.3 0.663461538461538 46 4 66.3 0 139 2 5 50 MEF8941717.1 response regulator [Desulfohalobiaceae bacterium] diamond 138 84 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
29033164 29033164 PRJNA382357_P_NODE_119568_length_223_cov_5.172840_g118829_i0 PRJNA382357 119568 223 5.17284 11.5354332 Desulfuromonas sp. 892 Bacteria Bacteria 72 1.37e-12   NR MDY0189429.1 892 g118829 i0 75 1.52017937219731 40 10 53.8 0 154 35 409 448 MDY0189429.1 acyl-CoA carboxylase subunit beta [Desulfuromonas sp.] diamond 339 72 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp.
29253808 29253808 PRJNA382357_P_NODE_33349_length_393_cov_1.569277_g32610_i0 PRJNA382357 33349 393 1.569277 6.16725861 Desulfuromonadales bacterium 2099678 Bacteria Bacteria 114 2.08e-26   NR MDF1580936.1 2099678 g32610 i0 81 0.480916030534351 63 12 48.1 0 392 204 278 340 MDF1580936.1 site-specific DNA-methyltransferase [Desulfuromonadales bacterium] diamond 189 114 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales     Desulfuromonadales bacterium
29285475 29285475 PRJNA382357_P_NODE_55709_length_313_cov_1.519841_g54970_i0 PRJNA382357 55709 313 1.519841 4.75710233 Desulfuromonas sp. 892 Bacteria Bacteria 88.2 7.68e-20   NR PLX96620.1 892 g54970 i0 48.8 0.78594249201278 82 42 78.6 0 67 312 44 125 PLX96620.1 MAG: gamma-glutamylcyclotransferase [Desulfuromonas sp.] diamond 246 88.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp.
30264934 30264934 PRJNA382357_P_NODE_124912_length_219_cov_1.088608_g124173_i0 PRJNA382357 124912 219 1.088608 2.38405152 Desulfobacterales bacterium 2044940 Bacteria Bacteria 42 0.044   NR MCP4349423.1 2044940 g124173 i0 53.1 0.876712328767123 32 15 43.8 0 122 217 181 212 MCP4349423.1 hypothetical protein [Desulfobacterales bacterium] diamond 192 42 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31781674 31781674 PRJNA382357_P_NODE_163677_length_189_cov_2.062500_g162938_i0 PRJNA382357 163677 189 2.0625 3.898125 Solidesulfovibrio alcoholivorans 81406 Bacteria Bacteria 62.4 2.19e-9   NR WP_029457415.1 81406 g162938 i0 96.7 0.476190476190476 30 1 47.6 0 189 100 278 307 WP_029457415.1 PAS domain-containing protein [Solidesulfovibrio alcoholivorans] diamond 90 62.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Solidesulfovibrio Solidesulfovibrio alcoholivorans
31798628 31798628 PRJNA382357_P_NODE_87537_length_256_cov_14.169231_g86798_i0 PRJNA382357 87537 256 14.169231 36.27323136 Pseudomonadati 3379134 Bacteria Bacteria 80.5 2.26e-15   NR WP_162459126.1 83564 g86798 i0 70.2 6.64453125 47 14 55.1 0 1 141 74 120 WP_162459126.1 phage terminase large subunit family protein [Desulfosarcina ovata] diamond 1701 81.3 0.990159901599016 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosarcinaceae Desulfosarcina Desulfosarcina ovata
31908414 31908414 PRJNA382357_P_NODE_54417_length_316_cov_2.070588_g53678_i0 PRJNA382357 54417 316 2.070588 6.54305808 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 87.4 6.47e-19   NR MBA3014277.1 2053307 g53678 i0 50.7 0.674050632911392 71 35 67.4 0 90 302 114 184 MBA3014277.1 hypothetical protein [Desulfobulbaceae bacterium] diamond 213 87.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
32003295 32003295 PRJNA382357_P_NODE_109978_length_232_cov_1.801170_g109239_i0 PRJNA382357 109978 232 1.80117 4.1787144 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 42 0.0494   NR MFC1813925.1 2202153 g109239 i0 30.9 0.711206896551724 55 38 71.1 0 62 226 107 161 MFC1813925.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 165 42 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32051904 32051904 PRJNA382357_P_NODE_103378_length_238_cov_7.610169_g102639_i0 PRJNA382357 103378 238 7.610169 18.11220222 Bacteria 2 Bacteria Bacteria 47.8 6.28e-4   NR MEW5736956.1 2202153 g102639 i0 50 2.53361344537815 54 26 68.1 1 223 62 863 915 MEW5736956.1 DEAD/DEAH box helicase family protein [Thermodesulfobacteriota bacterium] diamond 603 48.1 0.993762993762994 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32161697 32161697 PRJNA382357_P_NODE_169038_length_174_cov_11.132743_g168299_i0 PRJNA382357 169038 174 11.132743 19.37097282 Geobacteraceae bacterium 2282154 Bacteria Bacteria 64.3 5.32e-12   NR RPI71492.1 2282154 g168299 i0 80 0.689655172413793 40 8 69 0 166 47 6 45 RPI71492.1 MAG: hypothetical protein EHM38_03805 [Geobacteraceae bacterium] diamond 120 64.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
32305357 32305357 PRJNA382357_P_NODE_124339_length_219_cov_1.974684_g123600_i0 PRJNA382357 124339 219 1.974684 4.32455796 Pseudomonadati 3379134 Bacteria Bacteria 68.9 1.39e-11   NR HKZ46425.1 2202153 g123600 i0 75.6 1.86301369863014 45 11 61.6 0 136 2 133 177 HKZ46425.1 ubiquitin-activating E1 FCCH domain-containing protein [Thermodesulfobacteriota bacterium] diamond 408 69.3 0.994227994227994 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32400124 32400124 PRJNA382357_P_NODE_141619_length_208_cov_0.884354_g140880_i0 PRJNA382357 141619 208 0.884354 1.83945632 Pseudomonadati 3379134 Bacteria Bacteria 121 2.27e-31   NR WP_211248472.1 53332 g140880 i0 91.2 1.64423076923077 57 5 82.2 0 177 7 81 137 WP_211248472.1 RNA-directed DNA polymerase [Desulfobulbus elongatus] diamond 342 121 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus elongatus
32589906 32589906 PRJNA382357_P_NODE_96539_length_246_cov_1.275676_g95800_i0 PRJNA382357 96539 246 1.275676 3.13816296 Desulfovibrio 872 Bacteria Bacteria 57 3.52e-7   NR WP_303865849.1 901 g95800 i0 43.9 2.08536585365854 57 31 68.3 1 11 178 234 290 WP_303865849.1 hypothetical protein [Desulfovibrio piger] diamond 513 57 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio piger
32667137 32667137 PRJNA382357_P_NODE_112960_length_229_cov_2.375000_g112221_i0 PRJNA382357 112960 229 2.375 5.43875 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 92.4 3.32e-21   NR MEF8824023.1 2683721 g112221 i0 95.7 0.615720524017467 47 2 61.6 0 87 227 1 47 MEF8824023.1 L-threonylcarbamoyladenylate synthase [Desulfohalobiaceae bacterium] diamond 141 92.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
32698696 32698696 PRJNA382357_P_NODE_88980_length_255_cov_1.108247_g88241_i0 PRJNA382357 88980 255 1.108247 2.82602985 Desulfuromonadaceae bacterium 2099677 Bacteria Bacteria 53.5 6.9e-6   NR MDD2580852.1 2099677 g88241 i0 36.1 2.65882352941176 83 38 80 2 49 252 182 264 MDD2580852.1 diguanylate cyclase [Desulfuromonadaceae bacterium] diamond 678 53.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae   Desulfuromonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;