contig_metadata
59 rows where analysis = "diamond", bioproject = "PRJNA382357" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2350018 | 2350018 | PRJNA382357_P_NODE_149862_length_204_cov_1.818182_g149123_i0 | PRJNA382357 | 149862 | 204 | 1.818182 | 3.70909128 | Nitrospira | 1234 | Bacteria | Bacteria | 82.4 | 2.29e-16 | NR | MBH0193493.1 | 70125 | g149123 | i0 | 85.7 | 8.88235294117647 | 42 | 6 | 61.8 | 0 | 2 | 127 | 161 | 202 | MBH0193493.1 ABC-F family ATP-binding cassette domain-containing protein [Nitrospira sp.] | diamond | 1812 | 82.8 | 0.995169082125604 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 5507686 | 5507686 | PRJNA382357_P_NODE_52185_length_322_cov_1.490421_g51446_i0 | PRJNA382357 | 52185 | 322 | 1.490421 | 4.79915562 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 106 | 2.11e-26 | NR | HEV2172815.1 | 70125 | g51446 | i0 | 89.7 | 6.59627329192547 | 58 | 6 | 54 | 0 | 2 | 175 | 118 | 175 | HEV2172815.1 ABC transporter ATP-binding protein [Nitrospira sp.] | diamond | 2124 | 107 | 0.990654205607477 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 5507788 | 5507788 | PRJNA382357_P_NODE_58185_length_307_cov_1.520325_g57446_i0 | PRJNA382357 | 58185 | 307 | 1.520325 | 4.66739775 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 63.9 | 5.08e-10 | NR | HNG00851.1 | 70125 | g57446 | i0 | 76 | 0.488599348534202 | 50 | 12 | 48.9 | 0 | 157 | 8 | 35 | 84 | HNG00851.1 hypothetical protein [Nitrospira sp.] | diamond | 150 | 63.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22751247 | 22751247 | PRJNA382357_P_NODE_114338_length_228_cov_1.377246_g113599_i0 | PRJNA382357 | 114338 | 228 | 1.377246 | 3.14012088 | Nitrospira | 1234 | Bacteria | Bacteria | 73.2 | 5.51e-13 | NR | TKB94875.1 | 70125 | g113599 | i0 | 94.9 | 2.56578947368421 | 39 | 2 | 51.3 | 0 | 2 | 118 | 255 | 293 | TKB94875.1 MAG: sigma-54-dependent Fis family transcriptional regulator [Nitrospira sp.] | diamond | 585 | 73.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 24026225 | 24026225 | PRJNA382357_P_NODE_123119_length_220_cov_2.578616_g122380_i0 | PRJNA382357 | 123119 | 220 | 2.578616 | 5.6729552 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 95.9 | 5.92e-22 | NR | HEX9741583.1 | 2026770 | g122380 | i0 | 62.5 | 0.981818181818182 | 72 | 19 | 98.2 | 1 | 3 | 218 | 193 | 256 | HEX9741583.1 tRNA 2-thiocytidine(32) synthetase TtcA [Nitrospiraceae bacterium] | diamond | 216 | 95.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 24628745 | 24628745 | PRJNA382357_P_NODE_109660_length_232_cov_5.368421_g108921_i0 | PRJNA382357 | 109660 | 232 | 5.368421 | 12.45473672 | Nitrospira | 1234 | Bacteria | Bacteria | 85.5 | 2.85e-17 | NR | MBP0129506.1 | 70125 | g108921 | i0 | 80.4 | 12.6594827586207 | 46 | 9 | 59.5 | 0 | 180 | 43 | 110 | 155 | MBP0129506.1 leucine--tRNA ligase [Nitrospira sp.] | diamond | 2937 | 85.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26916890 | 26916890 | PRJNA382357_P_NODE_171442_length_168_cov_3.299065_g170703_i0 | PRJNA382357 | 171442 | 168 | 3.299065 | 5.5424292 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 44.3 | 0.003 | NR | HMU56617.1 | 70125 | g170703 | i0 | 62.5 | 0.571428571428571 | 32 | 12 | 57.1 | 0 | 123 | 28 | 163 | 194 | HMU56617.1 DUF2815 family protein [Nitrospira sp.] | diamond | 96 | 44.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27011697 | 27011697 | PRJNA382357_P_NODE_132442_length_212_cov_3.317881_g131703_i0 | PRJNA382357 | 132442 | 212 | 3.317881 | 7.03390772 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 92.4 | 1.13e-20 | NR | MEK7300486.1 | 2026887 | g131703 | i0 | 91.1 | 1.91037735849057 | 45 | 4 | 63.7 | 0 | 154 | 20 | 237 | 281 | MEK7300486.1 FAD-binding protein [Nitrospirota bacterium] | diamond | 405 | 92.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 27011723 | 27011723 | PRJNA382357_P_NODE_154882_length_202_cov_1.390071_g154143_i0 | PRJNA382357 | 154882 | 202 | 1.390071 | 2.80794342 | Candidatus Nitrospira nitrificans | 1742973 | Bacteria | Bacteria | 45.4 | 3.68e-4 | NR | CUS31476.1 | 1742973 | g154143 | i0 | 76.9 | 0.386138613861386 | 26 | 6 | 38.6 | 0 | 93 | 170 | 53 | 78 | CUS31476.1 hypothetical protein COMA2_10123 [Candidatus Nitrospira nitrificans] | diamond | 78 | 45.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira nitrificans | ||
| 27092047 | 27092047 | PRJNA382357_P_NODE_127482_length_216_cov_4.180645_g126743_i0 | PRJNA382357 | 127482 | 216 | 4.180645 | 9.0301932 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 63.2 | 1.57e-9 | NR | MCA9466322.1 | 70125 | g126743 | i0 | 59.1 | 1.22222222222222 | 44 | 18 | 61.1 | 0 | 85 | 216 | 267 | 310 | MCA9466322.1 recombinase zinc beta ribbon domain-containing protein [Nitrospira sp.] | diamond | 264 | 63.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27359788 | 27359788 | PRJNA382357_P_NODE_89363_length_254_cov_4.279793_g88624_i0 | PRJNA382357 | 89363 | 254 | 4.279793 | 10.87067422 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 105 | 2.6899999999999994e-24 | NR | MCS6286106.1 | 70125 | g88624 | i0 | 82.6 | 1.62992125984252 | 69 | 10 | 81.5 | 1 | 207 | 1 | 1625 | 1691 | MCS6286106.1 PAS domain S-box protein [Nitrospira sp.] | diamond | 414 | 105 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27391366 | 27391366 | PRJNA382357_P_NODE_75823_length_273_cov_4.896226_g75084_i0 | PRJNA382357 | 75823 | 273 | 4.896226 | 13.36669698 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 80.1 | 1.09e-15 | NR | MCI0529279.1 | 70125 | g75084 | i0 | 70.6 | 0.56043956043956 | 51 | 15 | 56 | 0 | 94 | 246 | 186 | 236 | MCI0529279.1 hypothetical protein [Nitrospira sp.] | diamond | 153 | 80.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27422957 | 27422957 | PRJNA382357_P_NODE_163703_length_188_cov_64.826772_g162964_i0 | PRJNA382357 | 163703 | 188 | 64.826772 | 121.87433136 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 65.1 | 2.33e-10 | NR | MCS6286602.1 | 70125 | g162964 | i0 | 100 | 0.49468085106383 | 31 | 0 | 49.5 | 0 | 157 | 65 | 20 | 50 | MCS6286602.1 ABC transporter ATP-binding protein [Nitrospira sp.] | diamond | 93 | 65.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27580579 | 27580579 | PRJNA382357_P_NODE_90444_length_253_cov_1.718750_g89705_i0 | PRJNA382357 | 90444 | 253 | 1.71875 | 4.3484375 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 119 | 6.18e-29 | NR | MCG3774984.1 | 70125 | g89705 | i0 | 83.3 | 3.1304347826087 | 66 | 11 | 78.3 | 0 | 200 | 3 | 78 | 143 | MCG3774984.1 hypothetical protein [Nitrospira sp.] | diamond | 792 | 119 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27896183 | 27896183 | PRJNA382357_P_NODE_107285_length_234_cov_52.791908_g106546_i0 | PRJNA382357 | 107285 | 234 | 52.791908 | 123.53306472 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 113 | 7.64e-28 | NR | MCS6284779.1 | 70125 | g106546 | i0 | 98.2 | 0.730769230769231 | 57 | 1 | 73.1 | 0 | 58 | 228 | 239 | 295 | MCS6284779.1 conjugal transfer protein TraF [Nitrospira sp.] | diamond | 171 | 113 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27896250 | 27896250 | PRJNA382357_P_NODE_47485_length_336_cov_2.050909_g46746_i0 | PRJNA382357 | 47485 | 336 | 2.050909 | 6.89105424 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 169 | 1.49e-50 | NR | MDF0667113.1 | 70125 | g46746 | i0 | 97.8 | 0.794642857142857 | 89 | 2 | 79.5 | 0 | 269 | 3 | 25 | 113 | MDF0667113.1 hypothetical protein [Nitrospira sp.] | diamond | 267 | 169 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27896267 | 27896267 | PRJNA382357_P_NODE_78925_length_268_cov_4.096618_g78186_i0 | PRJNA382357 | 78925 | 268 | 4.096618 | 10.97893624 | Nitrospirales bacterium | 2358460 | Bacteria | Bacteria | 43.5 | 0.0186 | NR | MDO8546031.1 | 2358460 | g78186 | i0 | 31.3 | 0.92910447761194 | 83 | 44 | 92.9 | 2 | 3 | 251 | 118 | 187 | MDO8546031.1 hypothetical protein [Nitrospirales bacterium] | diamond | 249 | 43.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospirales bacterium | ||||
| 27927878 | 27927878 | PRJNA382357_P_NODE_120685_length_222_cov_7.850932_g119946_i0 | PRJNA382357 | 120685 | 222 | 7.850932 | 17.42906904 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 42.7 | 0.0291 | NR | HSV90933.1 | 2026770 | g119946 | i0 | 48.1 | 0.702702702702703 | 52 | 26 | 70.3 | 1 | 220 | 65 | 567 | 617 | HSV90933.1 diguanylate cyclase [Nitrospiraceae bacterium] | diamond | 156 | 42.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 27927952 | 27927952 | PRJNA382357_P_NODE_65025_length_292_cov_4.051948_g64286_i0 | PRJNA382357 | 65025 | 292 | 4.051948 | 11.83168816 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 72.8 | 2.39e-14 | NR | HNV25107.1 | 70125 | g64286 | i0 | 96.9 | 0.328767123287671 | 32 | 1 | 32.9 | 0 | 102 | 197 | 63 | 94 | HNV25107.1 hypothetical protein [Nitrospira sp.] | diamond | 96 | 72.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27959474 | 27959474 | PRJNA382357_P_NODE_55085_length_314_cov_8.920949_g54346_i0 | PRJNA382357 | 55085 | 314 | 8.920949 | 28.01177986 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 124 | 5.54e-31 | NR | MEP6957671.1 | 2026887 | g54346 | i0 | 84.6 | 0.621019108280255 | 65 | 10 | 62.1 | 0 | 118 | 312 | 226 | 290 | MEP6957671.1 patatin-like phospholipase family protein [Nitrospirota bacterium] | diamond | 195 | 124 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 27991209 | 27991209 | PRJNA382357_P_NODE_58505_length_306_cov_2.122449_g57766_i0 | PRJNA382357 | 58505 | 306 | 2.122449 | 6.49469394 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 143 | 8.339999999999998e-39 | NR | MDP9132901.1 | 2026887 | g57766 | i0 | 84.1 | 2.41176470588235 | 82 | 13 | 80.4 | 0 | 10 | 255 | 2 | 83 | MDP9132901.1 response regulator [Nitrospirota bacterium] | diamond | 738 | 143 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 28085701 | 28085701 | PRJNA382357_P_NODE_31305_length_404_cov_2.431487_g30566_i0 | PRJNA382357 | 31305 | 404 | 2.431487 | 9.82320748 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 129 | 1.29e-33 | NR | MEQ1627923.1 | 70125 | g30566 | i0 | 86.1 | 0.534653465346535 | 72 | 10 | 53.5 | 0 | 403 | 188 | 146 | 217 | MEQ1627923.1 DUF6502 family protein [Nitrospira sp.] | diamond | 216 | 129 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28085748 | 28085748 | PRJNA382357_P_NODE_85545_length_259_cov_1.969697_g84806_i0 | PRJNA382357 | 85545 | 259 | 1.969697 | 5.10151523 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 105 | 1.5999999999999999e-24 | NR | MBA0915315.1 | 70125 | g84806 | i0 | 69.5 | 2.84942084942085 | 82 | 16 | 84.6 | 1 | 257 | 39 | 291 | 372 | MBA0915315.1 putative lipid II flippase FtsW [Nitrospira sp.] | diamond | 738 | 105 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28211867 | 28211867 | PRJNA382357_P_NODE_76626_length_272_cov_1.729858_g75887_i0 | PRJNA382357 | 76626 | 272 | 1.729858 | 4.70521376 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 112 | 3.15e-29 | NR | MCS6287149.1 | 70125 | g75887 | i0 | 89.3 | 1.85294117647059 | 56 | 6 | 61.8 | 0 | 271 | 104 | 23 | 78 | MCS6287149.1 hypothetical protein [Nitrospira sp.] | diamond | 504 | 112 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28433111 | 28433111 | PRJNA382357_P_NODE_111906_length_230_cov_2.639053_g111167_i0 | PRJNA382357 | 111906 | 230 | 2.639053 | 6.0698219 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 85.5 | 2.78e-17 | NR | TKS60058.1 | 70125 | g111167 | i0 | 95.5 | 6.88695652173913 | 44 | 2 | 57.4 | 0 | 137 | 6 | 528 | 571 | TKS60058.1 MAG: DNA polymerase I [Nitrospira sp.] | diamond | 1584 | 85.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28528002 | 28528002 | PRJNA382357_P_NODE_131607_length_213_cov_1.559211_g130868_i0 | PRJNA382357 | 131607 | 213 | 1.559211 | 3.32111943 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 111 | 3.61e-27 | NR | HNV25109.1 | 70125 | g130868 | i0 | 98.4 | 0.887323943661972 | 63 | 1 | 88.7 | 0 | 189 | 1 | 74 | 136 | HNV25109.1 hypothetical protein [Nitrospira sp.] | diamond | 189 | 111 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28607945 | 28607945 | PRJNA382357_P_NODE_92527_length_250_cov_18.285714_g91788_i0 | PRJNA382357 | 92527 | 250 | 18.285714 | 45.714285 | Nitrospira | 1234 | Bacteria | Bacteria | 100 | 7.27e-24 | NR | MEC4890596.1 | 70125 | g91788 | i0 | 76.2 | 1.512 | 63 | 15 | 75.6 | 0 | 33 | 221 | 92 | 154 | MEC4890596.1 response regulator [Nitrospira sp.] | diamond | 378 | 101 | 0.99009900990099 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28811710 | 28811710 | PRJNA382357_P_NODE_97748_length_244_cov_11.289617_g97009_i0 | PRJNA382357 | 97748 | 244 | 11.289617 | 27.54666548 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 98.2 | 2.97e-22 | NR | NOT96182.1 | 70125 | g97009 | i0 | 81 | 1.41393442622951 | 58 | 9 | 71.3 | 1 | 42 | 215 | 296 | 351 | NOT96182.1 polyhydroxyalkanoate biosynthesis repressor PhaR [Nitrospira sp.] | diamond | 345 | 98.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28938379 | 28938379 | PRJNA382357_P_NODE_157088_length_200_cov_14.517986_g156349_i0 | PRJNA382357 | 157088 | 200 | 14.517986 | 29.035972 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 72 | 9.15e-13 | NR | MCS6285102.1 | 70125 | g156349 | i0 | 92.1 | 0.57 | 38 | 3 | 57 | 0 | 186 | 73 | 304 | 341 | MCS6285102.1 efflux RND transporter periplasmic adaptor subunit [Nitrospira sp.] | diamond | 114 | 72 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28938463 | 28938463 | PRJNA382357_P_NODE_89228_length_254_cov_12.834197_g88489_i0 | PRJNA382357 | 89228 | 254 | 12.834197 | 32.59886038 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 120 | 3.28e-31 | NR | HWV45140.1 | 70125 | g88489 | i0 | 96.6 | 0.68503937007874 | 58 | 2 | 68.5 | 0 | 6 | 179 | 47 | 104 | HWV45140.1 phage terminase large subunit [Nitrospira sp.] | diamond | 174 | 120 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28938470 | 28938470 | PRJNA382357_P_NODE_97828_length_244_cov_6.027322_g97089_i0 | PRJNA382357 | 97828 | 244 | 6.027322 | 14.70666568 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 70.9 | 4.16e-12 | NR | WP_053381355.1 | 42253 | g97089 | i0 | 71.4 | 0.602459016393443 | 49 | 14 | 60.2 | 0 | 67 | 213 | 3 | 51 | WP_053381355.1 helix-turn-helix transcriptional regulator [Nitrospira moscoviensis] | diamond | 147 | 70.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 28969912 | 28969912 | PRJNA382357_P_NODE_49428_length_330_cov_1.691450_g48689_i0 | PRJNA382357 | 49428 | 330 | 1.69145 | 5.581785 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 135 | 2.98e-34 | NR | MDF0643144.1 | 70125 | g48689 | i0 | 68.4 | 1.80909090909091 | 95 | 30 | 86.4 | 0 | 14 | 298 | 479 | 573 | MDF0643144.1 hypothetical protein [Nitrospira sp.] | diamond | 597 | 135 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29050077 | 29050077 | PRJNA382357_P_NODE_26968_length_432_cov_3.908356_g26230_i0 | PRJNA382357 | 26968 | 432 | 3.908356 | 16.88409792 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 95.5 | 2.67e-20 | NR | HNA87597.1 | 70125 | g26230 | i0 | 83.7 | 0.680555555555556 | 49 | 8 | 34 | 0 | 64 | 210 | 287 | 335 | HNA87597.1 hypothetical protein [Nitrospira sp.] | diamond | 294 | 95.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29302560 | 29302560 | PRJNA382357_P_NODE_97689_length_244_cov_22.426230_g96950_i0 | PRJNA382357 | 97689 | 244 | 22.42623 | 54.7200012 | Bacteria | 2 | Bacteria | Bacteria | 62.8 | 3.11e-9 | NR | HNG00901.1 | 70125 | g96950 | i0 | 96.8 | 0.762295081967213 | 31 | 1 | 38.1 | 0 | 2 | 94 | 354 | 384 | HNG00901.1 hypothetical protein [Nitrospira sp.] | diamond | 186 | 62.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29348861 | 29348861 | PRJNA382357_P_NODE_49889_length_328_cov_82.524345_g49150_i0 | PRJNA382357 | 49889 | 328 | 82.524345 | 270.6798516 | Nitrospira cf. moscoviensis SBR1 | 96242 | Bacteria | Bacteria | 111 | 4.7400000000000006e-27 | NR | WP_086426717.1 | 96242 | g49150 | i0 | 88.5 | 1.11585365853659 | 61 | 7 | 55.8 | 0 | 97 | 279 | 262 | 322 | WP_086426717.1 CobW family GTP-binding protein [Nitrospira cf. moscoviensis SBR1015] | diamond | 366 | 111 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira cf. moscoviensis SBR1015 | ||
| 29365768 | 29365768 | PRJNA382357_P_NODE_158489_length_198_cov_2.817518_g157750_i0 | PRJNA382357 | 158489 | 198 | 2.817518 | 5.57868564 | Nitrospira | 1234 | Bacteria | Bacteria | 80.5 | 1.06e-15 | NR | HSA85365.1 | 70125 | g157750 | i0 | 95.5 | 12.3939393939394 | 44 | 2 | 66.7 | 0 | 198 | 67 | 77 | 120 | HSA85365.1 CusA/CzcA family heavy metal efflux RND transporter [Nitrospira sp.] | diamond | 2454 | 80.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29523592 | 29523592 | PRJNA382357_P_NODE_153910_length_202_cov_658.304965_g153171_i0 | PRJNA382357 | 153910 | 202 | 658.304965 | 1329.7760293 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 44.3 | 0.00583 | NR | HNG00916.1 | 70125 | g153171 | i0 | 76.9 | 0.772277227722772 | 26 | 6 | 38.6 | 0 | 136 | 59 | 55 | 80 | HNG00916.1 FAD-dependent thymidylate synthase [Nitrospira sp.] | diamond | 156 | 44.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29632489 | 29632489 | PRJNA382357_P_NODE_109450_length_232_cov_33.356725_g108711_i0 | PRJNA382357 | 109450 | 232 | 33.356725 | 77.387602 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 93.2 | 7.28e-22 | NR | MCX5722178.1 | 2026887 | g108711 | i0 | 97.7 | 1.66810344827586 | 43 | 1 | 55.6 | 0 | 131 | 3 | 119 | 161 | MCX5722178.1 hypothetical protein [Nitrospirota bacterium] | diamond | 387 | 93.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 29632536 | 29632536 | PRJNA382357_P_NODE_25070_length_446_cov_5.225974_g24332_i0 | PRJNA382357 | 25070 | 446 | 5.225974 | 23.30784404 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 180 | 5.54e-53 | NR | TLY34026.1 | 2026887 | g24332 | i0 | 72.4 | 0.780269058295964 | 116 | 32 | 78 | 0 | 92 | 439 | 38 | 153 | TLY34026.1 MAG: toll/interleukin-1 receptor domain-containing protein [Nitrospirota bacterium] | diamond | 348 | 180 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 29727337 | 29727337 | PRJNA382357_P_NODE_157750_length_199_cov_7.036232_g157011_i0 | PRJNA382357 | 157750 | 199 | 7.036232 | 14.00210168 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 56.2 | 3.4e-7 | NR | MBH0199725.1 | 70125 | g157011 | i0 | 89.7 | 0.85929648241206 | 29 | 3 | 43.7 | 0 | 55 | 141 | 1 | 29 | MBH0199725.1 hypothetical protein [Nitrospira sp.] | diamond | 171 | 56.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29744350 | 29744350 | PRJNA382357_P_NODE_169470_length_173_cov_5.500000_g168731_i0 | PRJNA382357 | 169470 | 173 | 5.5 | 9.515 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 56.2 | 2.51e-7 | NR | MCG3774735.1 | 70125 | g168731 | i0 | 77.1 | 1.21387283236994 | 35 | 8 | 60.7 | 0 | 105 | 1 | 520 | 554 | MCG3774735.1 hypothetical protein [Nitrospira sp.] | diamond | 210 | 56.6 | 0.992932862190813 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29917261 | 29917261 | PRJNA382357_P_NODE_162111_length_191_cov_15.276923_g161372_i0 | PRJNA382357 | 162111 | 191 | 15.276923 | 29.17892293 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 73.9 | 1.86e-13 | NR | TKB79449.1 | 70125 | g161372 | i0 | 89.2 | 2.32460732984293 | 37 | 4 | 58.1 | 0 | 146 | 36 | 545 | 581 | TKB79449.1 MAG: CHAT domain-containing protein [Nitrospira sp.] | diamond | 444 | 73.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30218354 | 30218354 | PRJNA382357_P_NODE_154112_length_202_cov_11.184397_g153373_i0 | PRJNA382357 | 154112 | 202 | 11.184397 | 22.59248194 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 77.4 | 1.07e-14 | NR | HEX6824962.1 | 2026770 | g153373 | i0 | 94.9 | 2.8960396039604 | 39 | 2 | 57.9 | 0 | 175 | 59 | 302 | 340 | HEX6824962.1 polyribonucleotide nucleotidyltransferase [Nitrospiraceae bacterium] | diamond | 585 | 77.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 30612056 | 30612056 | PRJNA382357_P_NODE_171933_length_166_cov_10.485714_g171194_i0 | PRJNA382357 | 171933 | 166 | 10.485714 | 17.40628524 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 62 | 1.98e-9 | NR | MCC6140328.1 | 70125 | g171194 | i0 | 88.2 | 0.614457831325301 | 34 | 4 | 61.4 | 0 | 8 | 109 | 137 | 170 | MCC6140328.1 HEAT repeat domain-containing protein [Nitrospira sp.] | diamond | 102 | 62 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30959837 | 30959837 | PRJNA382357_P_NODE_50954_length_325_cov_10.856061_g50215_i0 | PRJNA382357 | 50954 | 325 | 10.856061 | 35.28219825 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 105 | 2.08e-24 | NR | MBX3330713.1 | 70125 | g50215 | i0 | 76.8 | 2.35384615384615 | 69 | 16 | 63.7 | 0 | 277 | 71 | 2 | 70 | MBX3330713.1 SpoIIE family protein phosphatase [Nitrospira sp.] | diamond | 765 | 105 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30959854 | 30959854 | PRJNA382357_P_NODE_63234_length_296_cov_1.382979_g62495_i0 | PRJNA382357 | 63234 | 296 | 1.382979 | 4.09361784 | Candidatus Nitrospira nitrificans | 1742973 | Bacteria | Bacteria | 44.3 | 0.0133 | NR | WP_090897176.1 | 1742973 | g62495 | i0 | 75 | 0.283783783783784 | 28 | 7 | 28.4 | 0 | 213 | 296 | 3 | 30 | WP_090897176.1 hypothetical protein [Candidatus Nitrospira nitrificans] | diamond | 84 | 44.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira nitrificans | ||
| 31022955 | 31022955 | PRJNA382357_P_NODE_134435_length_211_cov_1.293333_g133696_i0 | PRJNA382357 | 134435 | 211 | 1.293333 | 2.72893263 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 40.4 | 0.0323 | NR | MDH4252715.1 | 70125 | g133696 | i0 | 40.7 | 0.767772511848341 | 54 | 29 | 76.8 | 1 | 208 | 47 | 8 | 58 | MDH4252715.1 hypothetical protein [Nitrospira sp.] | diamond | 162 | 40.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31040194 | 31040194 | PRJNA382357_P_NODE_96875_length_245_cov_8.320652_g96136_i0 | PRJNA382357 | 96875 | 245 | 8.320652 | 20.3855974 | Nitrospira | 1234 | Bacteria | Bacteria | 108 | 3.6e-25 | NR | TKB33733.1 | 70125 | g96136 | i0 | 88.1 | 6.55102040816327 | 67 | 6 | 82 | 1 | 44 | 244 | 292 | 356 | TKB33733.1 MAG: DNA internalization-related competence protein ComEC/Rec2 [Nitrospira sp.] | diamond | 1605 | 109 | 0.990825688073395 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31307314 | 31307314 | PRJNA382357_P_NODE_143515_length_207_cov_1.246575_g142776_i0 | PRJNA382357 | 143515 | 207 | 1.246575 | 2.58041025 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 74.3 | 6.24e-15 | NR | MCG3776725.1 | 70125 | g142776 | i0 | 70.6 | 1.39130434782609 | 51 | 15 | 73.9 | 0 | 163 | 11 | 89 | 139 | MCG3776725.1 hypothetical protein [Nitrospira sp.] | diamond | 288 | 74.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31528978 | 31528978 | PRJNA382357_P_NODE_69716_length_283_cov_9.274775_g68977_i0 | PRJNA382357 | 69716 | 283 | 9.274775 | 26.24761325 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 146 | 6.6499999999999986e-40 | NR | MDQ1291926.1 | 2026887 | g68977 | i0 | 97.2 | 14.5017667844523 | 72 | 2 | 76.3 | 0 | 282 | 67 | 149 | 220 | MDQ1291926.1 glutamyl-tRNA synthetase [Nitrospirota bacterium] | diamond | 4104 | 146 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 31781714 | 31781714 | PRJNA382357_P_NODE_60897_length_301_cov_1.045833_g60158_i0 | PRJNA382357 | 60897 | 301 | 1.045833 | 3.14795733 | Thermodesulfovibrionales bacterium | 2814272 | Bacteria | Bacteria | 98.6 | 9.72e-22 | NR | MCX8026657.1 | 2814272 | g60158 | i0 | 81.7 | 0.598006644518272 | 60 | 11 | 59.8 | 0 | 246 | 67 | 296 | 355 | MCX8026657.1 phosphopyruvate hydratase [Thermodesulfovibrionales bacterium] | diamond | 180 | 98.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Thermodesulfovibrionales bacterium | ||||
| 31876581 | 31876581 | PRJNA382357_P_NODE_136417_length_210_cov_1.563758_g135678_i0 | PRJNA382357 | 136417 | 210 | 1.563758 | 3.2838918 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 41.2 | 0.0186 | NR | HEX7092660.1 | 2026770 | g135678 | i0 | 90 | 0.285714285714286 | 20 | 2 | 28.6 | 0 | 62 | 3 | 55 | 74 | HEX7092660.1 polyprenyl synthetase family protein [Nitrospiraceae bacterium] | diamond | 60 | 41.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 31908408 | 31908408 | PRJNA382357_P_NODE_48077_length_334_cov_2.380952_g47338_i0 | PRJNA382357 | 48077 | 334 | 2.380952 | 7.95237968 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 150 | 1.51e-41 | NR | HEX9136513.1 | 2026887 | g47338 | i0 | 83.3 | 1.61676646706587 | 90 | 15 | 80.8 | 0 | 63 | 332 | 178 | 267 | HEX9136513.1 IS3 family transposase [Nitrospirota bacterium] | diamond | 540 | 150 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 31971657 | 31971657 | PRJNA382357_P_NODE_95878_length_246_cov_30.989189_g95139_i0 | PRJNA382357 | 95878 | 246 | 30.989189 | 76.23340494 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 75.9 | 4.87e-14 | NR | MBX3318437.1 | 70125 | g95139 | i0 | 70.5 | 3.52439024390244 | 44 | 13 | 53.7 | 0 | 2 | 133 | 171 | 214 | MBX3318437.1 alpha/beta fold hydrolase [Nitrospira sp.] | diamond | 867 | 75.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32034908 | 32034908 | PRJNA382357_P_NODE_100598_length_241_cov_7.505556_g99859_i0 | PRJNA382357 | 100598 | 241 | 7.505556 | 18.08838996 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 115 | 4.8e-30 | NR | MCG3768494.1 | 70125 | g99859 | i0 | 93 | 0.70954356846473 | 57 | 4 | 71 | 0 | 186 | 16 | 120 | 176 | MCG3768494.1 Lon protease 2 [Nitrospira sp.] | diamond | 171 | 115 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32256836 | 32256836 | PRJNA382357_P_NODE_72438_length_279_cov_0.967890_g71699_i0 | PRJNA382357 | 72438 | 279 | 0.96789 | 2.7004131 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 116 | 3.12e-28 | NR | MCG3773343.1 | 70125 | g71699 | i0 | 76.4 | 0.774193548387097 | 72 | 13 | 73.1 | 1 | 230 | 27 | 399 | 470 | MCG3773343.1 hypothetical protein [Nitrospira sp.] | diamond | 216 | 116 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32541400 | 32541400 | PRJNA382357_P_NODE_102699_length_239_cov_2.191011_g101960_i0 | PRJNA382357 | 102699 | 239 | 2.191011 | 5.23651629 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 79.3 | 4.31e-15 | NR | PHX90955.1 | 2026887 | g101960 | i0 | 85.1 | 1.19246861924686 | 47 | 7 | 59 | 0 | 18 | 158 | 284 | 330 | PHX90955.1 MAG: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE [Nitrospirota bacterium] | diamond | 285 | 79.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 32635521 | 32635521 | PRJNA382357_P_NODE_158340_length_198_cov_5.102190_g157601_i0 | PRJNA382357 | 158340 | 198 | 5.10219 | 10.1023362 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 80.5 | 1.12e-17 | NR | HBH78771.1 | 70125 | g157601 | i0 | 95.1 | 0.621212121212121 | 41 | 2 | 62.1 | 0 | 185 | 63 | 9 | 49 | HBH78771.1 5,10-methylenetetrahydrofolate reductase [Nitrospira sp.] | diamond | 123 | 80.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32635560 | 32635560 | PRJNA382357_P_NODE_54260_length_316_cov_25.556863_g53521_i0 | PRJNA382357 | 54260 | 316 | 25.556863 | 80.75968708 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 165 | 8.04e-47 | NR | MCX5724940.1 | 2026887 | g53521 | i0 | 92.7 | 2.33544303797468 | 82 | 6 | 77.8 | 0 | 309 | 64 | 34 | 115 | MCX5724940.1 DUF1015 domain-containing protein [Nitrospirota bacterium] | diamond | 738 | 165 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;