RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA382357" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382357 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27106494 27106494 PRJNA382357_P_NODE_141682_length_208_cov_0.884354_g140943_i0 PRJNA382357 141682 208 0.884354 1.83945632 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 77.8 1.06e-14   NR MDD5589521.1 2910166 g140943 i0 56.1 1.93269230769231 66 29 95.2 0 201 4 428 493 MDD5589521.1 N-6 DNA methylase [Candidatus Nanoarchaeia archaeon] diamond 402 77.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
28591094 28591094 PRJNA382357_P_NODE_47747_length_335_cov_2.335766_g47008_i0 PRJNA382357 47747 335 2.335766 7.8248161 Nanobdellota archaeon 2026764 Archaea Archaea 48.5 9.27e-4   NR MCA9495558.1 2026764 g47008 i0 41.5 0.734328358208955 82 45 72.5 3 4 246 98 177 MCA9495558.1 transposase [Nanoarchaeota archaeon] diamond 246 48.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28811620 28811620 PRJNA382357_P_NODE_12708_length_595_cov_15.230337_g11989_i0 PRJNA382357 12708 595 15.230337 90.62050515 Nanobdellota archaeon 2026764 Archaea Archaea 83.2 6.26e-15   NR MDO8656368.1 2026764 g11989 i0 47.9 1.64873949579832 96 38 43.4 2 308 51 279 372 MDO8656368.1 phosphoglycerate kinase [Nanoarchaeota archaeon] diamond 981 83.2 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;