RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA382357" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382357 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27233183 27233183 PRJNA382357_P_NODE_84463_length_261_cov_0.960000_g83724_i0 PRJNA382357 84463 261 0.96 2.5056 Hordeum vulgare alphaendornavirus 1774276 Viruses Viruses 127 5.909999999999999e-32   NR QHA94750.1 1774276 g83724 i0 73.3 0.988505747126437 86 23 98.9 0 3 260 4197 4282 QHA94750.1 polyprotein [Hordeum vulgare alphaendornavirus] diamond 258 127 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus hordei
27517468 27517468 PRJNA382357_P_NODE_23043_length_463_cov_12.500000_g22307_i0 PRJNA382357 23043 463 12.5 57.875 Hordeum vulgare alphaendornavirus 1774276 Viruses Viruses 80.1 4.15e-14   NR QHA94750.1 1774276 g22307 i0 34.1 0.816414686825054 126 81 81 2 89 463 3584 3708 QHA94750.1 polyprotein [Hordeum vulgare alphaendornavirus] diamond 378 80.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus hordei
28338406 28338406 PRJNA382357_P_NODE_157526_length_200_cov_2.021583_g156787_i0 PRJNA382357 157526 200 2.021583 4.043166 Hordeum vulgare alphaendornavirus 1774276 Viruses Viruses 67.4 4.33e-11   NR QHA94750.1 1774276 g156787 i0 49.2 0.975 65 31 96 2 1 192 3570 3633 QHA94750.1 polyprotein [Hordeum vulgare alphaendornavirus] diamond 195 67.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus hordei
28338432 28338432 PRJNA382357_P_NODE_41766_length_355_cov_27.700680_g41027_i0 PRJNA382357 41766 355 27.70068 98.337414 Garlic virus E 150285 Viruses Viruses 149 4.45e-39   NR NP_659010.1 150285 g41027 i0 81.9 0.794366197183099 94 17 79.4 0 283 2 550 643 NP_659010.1 hypothetical protein GvEgp1 [Garlic virus E] diamond 282 149 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus epsalii
28938430 28938430 PRJNA382357_P_NODE_6008_length_815_cov_2.192308_g5368_i0 PRJNA382357 6008 815 2.192308 17.8673102 Grapevine wood holobiome associated deltaflexivirus 2 3384488 Viruses Viruses 48.9 0.00569   NR XLE34830.1 3384488 g5368 i0 31.8 0.323926380368098 88 60 32.4 0 438 701 110 197 XLE34830.1 hypothetical protein [Grapevine wood holobiome associated deltaflexivirus 2] diamond 264 48.9 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Grapevine wood holobiome associated deltaflexivirus 2
29001833 29001833 PRJNA382357_P_NODE_169508_length_173_cov_4.383929_g168769_i0 PRJNA382357 169508 173 4.383929 7.58419717 Hordeum vulgare alphaendornavirus 1774276 Viruses Viruses 45.4 0.00166   NR QHA94750.1 1774276 g168769 i0 62.1 0.502890173410405 29 11 50.3 0 3 89 350 378 QHA94750.1 polyprotein [Hordeum vulgare alphaendornavirus] diamond 87 45.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus hordei
30548979 30548979 PRJNA382357_P_NODE_3433_length_1024_cov_4.011423_g2887_i0 PRJNA382357 3433 1024 4.011423 41.07697152 Hordeum vulgare alphaendornavirus 1774276 Viruses Viruses 51.2 0.00708   NR QHA94750.1 1774276 g2887 i0 52.5 0.1171875 40 19 11.7 0 496 615 3513 3552 QHA94750.1 polyprotein [Hordeum vulgare alphaendornavirus] diamond 120 51.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus hordei
30959849 30959849 PRJNA382357_P_NODE_59174_length_305_cov_1.024590_g58435_i0 PRJNA382357 59174 305 1.02459 3.1249995 Hordeum vulgare alphaendornavirus 1774276 Viruses Viruses 152 2.58e-40   NR QHA94750.1 1774276 g58435 i0 74.7 0.895081967213115 91 23 89.5 0 32 304 2655 2745 QHA94750.1 polyprotein [Hordeum vulgare alphaendornavirus] diamond 273 152 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus hordei
31623669 31623669 PRJNA382357_P_NODE_42956_length_351_cov_3.527586_g42217_i0 PRJNA382357 42956 351 3.527586 12.38182686 Hordeum vulgare alphaendornavirus 1774276 Viruses Viruses 99.4 1.95e-21   NR QHA94750.1 1774276 g42217 i0 71.7 0.512820512820513 60 17 51.3 0 2 181 2673 2732 QHA94750.1 polyprotein [Hordeum vulgare alphaendornavirus] diamond 180 99.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus hordei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;