RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA382357" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA382357 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27011740 27011740 PRJNA382357_P_NODE_19382_length_499_cov_6.100457_g18649_i0 PRJNA382357 19382 499 6.100457 30.44128043 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0404   NR YP_009709947.1 1928728 g18649 i0 44.2 0.258517034068136 43 24 25.9 0 497 369 84 126 YP_009709947.1 ribosomal protein L14 [Paulinella micropora] diamond 129 43.9 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
31577511 31577511 PRJNA382357_P_NODE_44556_length_346_cov_1.045614_g43817_i0 PRJNA382357 44556 346 1.045614 3.61782444 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 59.7 7.98e-9   NR MES1917405.1 1215613 g43817 i0 64.7 1.31791907514451 34 12 29.5 0 1 102 50 83 MES1917405.1 CCR4-NOT transcription complex subunit 1 [Cercozoa sp. M6MM] diamond 456 59.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32178691 32178691 PRJNA382357_P_NODE_41418_length_357_cov_1.462838_g40679_i0 PRJNA382357 41418 357 1.462838 5.22233166 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0472   NR MES1910043.1 1215613 g40679 i0 32.8 1.12605042016807 61 36 47.1 1 183 350 4 64 MES1910043.1 hypothetical protein [Cercozoa sp. M6MM] diamond 402 43.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;