RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA382357" and tax_phylum = "Candidatus Azamiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Azamiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27454493 27454493 PRJNA382357_P_NODE_167943_length_177_cov_28.913793_g167204_i0 PRJNA382357 167943 177 28.913793 51.17741361 Candidatus Azambacteria bacterium 2053511 Bacteria Bacteria 69.7 4.64e-12   NR MBI5913258.1 2053511 g167204 i0 97.1 1.11864406779661 34 1 57.6 0 2 103 605 638 MBI5913258.1 penicillin-binding protein 2 [Candidatus Azambacteria bacterium] diamond 198 69.7 1 Bacteria Bacteria candidate phyla   Candidatus Azamiibacteriota         Candidatus Azambacteria bacterium
28843450 28843450 PRJNA382357_P_NODE_91588_length_252_cov_1.020942_g90849_i0 PRJNA382357 91588 252 1.020942 2.57277384 Candidatus Azambacteria bacterium 2053511 Bacteria Bacteria 87.8 7.57e-20   NR MDO8443543.1 2053511 g90849 i0 67.8 6.33333333333333 59 19 70.2 0 74 250 45 103 MDO8443543.1 group I intron-associated PD-(D/E)XK endonuclease [Candidatus Azambacteria bacterium] diamond 1596 87.8 1 Bacteria Bacteria candidate phyla   Candidatus Azamiibacteriota         Candidatus Azambacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;