RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA380660" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380660 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30345334 30345334 PRJNA380660_P_NODE_7832_length_252_cov_3.165919_g7432_i0 PRJNA380660 7832 252 3.165919 7.97811588 Adineta 104781 Rotifera other_Eukaryota 52.4 7.77e-7   NR UJR16599.1 104782 g7432 i0 58.1 0.869047619047619 43 18 51.2 0 207 79 1 43 UJR16599.1 hypothetical protein I4U23_003499 [Adineta vaga] diamond 219 52.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
32161648 32161648 PRJNA380660_P_NODE_6838_length_283_cov_1.696850_g6438_i0 PRJNA380660 6838 283 1.69685 4.8020855 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 95.1 9.56e-21   NR CAF0925001.1 1234261 g6438 i0 47.2 0.943462897526502 89 47 94.3 0 16 282 138 226 CAF0925001.1 unnamed protein product [Didymodactylos carnosus] diamond 267 95.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
32573017 32573017 PRJNA380660_P_NODE_5379_length_337_cov_1.740260_g4980_i0 PRJNA380660 5379 337 1.74026 5.8646762 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 63.5 5.72e-9   NR CAF4960535.1 2762511 g4980 i0 36.3 4.54005934718101 102 59 85.5 1 50 337 793 894 CAF4960535.1 unnamed protein product [Rotaria sp. Silwood1] diamond 1530 63.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;