RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA380660" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA380660 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27485849 27485849 PRJNA380660_P_NODE_2523_length_532_cov_3.467197_g2163_i0 PRJNA380660 2523 532 3.467197 18.44548804 Emiliania huxleyi virus 86 181082 Viruses Viruses 77.8 4.41e-13   NR YP_293932.1 181082 g2163 i0 36.7 0.721804511278195 128 74 72.2 2 532 149 367 487 YP_293932.1 Major Facilitator Superfamily protein [Emiliania huxleyi virus 86] diamond 384 77.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Coccolithovirus Coccolithovirus huxleyi
28369821 28369821 PRJNA380660_P_NODE_1426_length_716_cov_5.687045_g1126_i0 PRJNA380660 1426 716 5.687045 40.7192422 Emiliania huxleyi virus 86 181082 Viruses Viruses 104 1.3e-21   NR YP_293932.1 181082 g1126 i0 37 1.29050279329609 154 90 64.5 2 716 255 326 472 YP_293932.1 Major Facilitator Superfamily protein [Emiliania huxleyi virus 86] diamond 924 104 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Coccolithovirus Coccolithovirus huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;