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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA380660" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_kingdom 1

  • Bacillati · 24 ✖

bioproject 1

  • PRJNA380660 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1677012 1677012 PRJNA380660_P_NODE_4582_length_375_cov_3.014451_g4185_i0 PRJNA380660 4582 375 3.014451 11.30419125 Clostridia bacterium 2044939 Bacteria Bacteria 134 6.83e-36   NR MFA7674270.1 2044939 g4185 i0 78.5 0.632 79 17 63.2 0 1 237 185 263 MFA7674270.1 type I glyceraldehyde-3-phosphate dehydrogenase [Clostridia bacterium] diamond 237 134 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
9330344 9330344 PRJNA380660_P_NODE_8628_length_233_cov_1.901961_g8228_i0 PRJNA380660 8628 233 1.901961 4.43156913 Bacillati 1783272 Bacteria Bacteria 103 9.34e-24   NR WP_294352809.1 59620 g8228 i0 86.4 117.978540772532 59 7 76 1 179 3 568 625 WP_294352809.1 ATP-dependent Clp protease ATP-binding subunit [uncultured Clostridium sp.] diamond 27489 104 0.990384615384615 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium uncultured Clostridium sp.
14430966 14430966 PRJNA380660_P_NODE_1032_length_850_cov_2.555420_g785_i0 PRJNA380660 1032 850 2.55542 21.72107 Ktedonobacteria bacterium brp13 2717365 Bacteria Bacteria 196 7.58e-59   NR BCL82548.1 2717365 g785 i0 47.6 0.748235294117647 212 90 74.8 4 88 723 1 191 BCL82548.1 superoxide dismutase [Ktedonobacteria bacterium brp13] diamond 636 196 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria       Ktedonobacteria bacterium brp13
23354306 23354306 PRJNA380660_P_NODE_8479_length_236_cov_4.599034_g8079_i0 PRJNA380660 8479 236 4.599034 10.85372024 Streptococcus mitis 28037 Bacteria Bacteria 102 3.51e-24   NR MFS9207101.1 28037 g8079 i0 73.4 3.72457627118644 79 19 97.9 1 234 4 106 184 MFS9207101.1 hypothetical protein [Streptococcus mitis] diamond 879 102 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis
26726435 26726435 PRJNA380660_P_NODE_7321_length_267_cov_3.500000_g6921_i0 PRJNA380660 7321 267 3.5 9.345 Gaiellaceae bacterium 2838783 Bacteria Bacteria 43.5 0.0226   NR HST17223.1 2838783 g6921 i0 52.2 0.51685393258427 46 20 49.4 2 105 236 35 80 HST17223.1 hypothetical protein [Gaiellaceae bacterium] diamond 138 43.5 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Gaiellales Gaiellaceae   Gaiellaceae bacterium
27359654 27359654 PRJNA380660_P_NODE_12003_length_169_cov_1.357143_g11603_i0 PRJNA380660 12003 169 1.357143 2.29357167 Prochlorococcus marinus 1219 Bacteria Bacteria 61.6 3e-9   NR WP_269622964.1 1219 g11603 i0 48.1 0.923076923076923 52 27 92.3 0 166 11 361 412 WP_269622964.1 threonine ammonia-lyase, biosynthetic [Prochlorococcus marinus] diamond 156 61.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Prochlorococcus Prochlorococcus marinus
27422910 27422910 PRJNA380660_P_NODE_3743_length_423_cov_3.718274_g3354_i0 PRJNA380660 3743 423 3.718274 15.72829902 Nostoc sp. 1180 Bacteria Bacteria 84.3 8.16e-16   NR WP_335051028.1 1180 g3354 i0 37.1 0.99290780141844 140 83 98.6 5 4 420 46 181 WP_335051028.1 hypothetical protein [Nostoc sp.] diamond 420 84.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp.
27597721 27597721 PRJNA380660_P_NODE_9904_length_209_cov_1.222222_g9504_i0 PRJNA380660 9904 209 1.222222 2.55444398 Bacillaceae 186817 Bacteria Bacteria 70.1 1.66e-12   NR WP_035195791.1 1454 g9504 i0 51.5 1.95215311004785 68 20 97.6 2 2 205 111 165 WP_035195791.1 pirin family protein [Schinkia azotoformans] diamond 408 70.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Schinkia Schinkia azotoformans
27787170 27787170 PRJNA380660_P_NODE_6944_length_279_cov_2.308000_g6544_i0 PRJNA380660 6944 279 2.308 6.43932 Bacteria 2 Bacteria Bacteria 119 5.33e-29   NR OGB89762.1 1802564 g6544 i0 59.1 22.3763440860215 93 38 100 0 1 279 1336 1428 OGB89762.1 MAG: glutamate synthase subunit alpha [candidate division WOR-1 bacterium RIFCSPHIGHO2_01_FULL_53_15] diamond 6243 119 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati           candidate division WOR-1 bacterium RIFCSPHIGHO2_01_FULL_53_15
27818770 27818770 PRJNA380660_P_NODE_8164_length_244_cov_1.572093_g7764_i0 PRJNA380660 8164 244 1.572093 3.83590692 Bacteria 2 Bacteria Bacteria 48.5 3.36e-4   NR WP_347222009.1 39694 g7764 i0 42.9 2.56967213114754 77 36 87.3 2 1 213 232 306 WP_347222009.1 integrin alpha, partial [Mycolicibacterium poriferae] diamond 627 48.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycolicibacterium Mycolicibacterium poriferae
28654086 28654086 PRJNA380660_P_NODE_12387_length_161_cov_1.590909_g11987_i0 PRJNA380660 12387 161 1.590909 2.56136349 Ilumatobacteraceae bacterium 2497619 Bacteria Bacteria 49.3 5.24e-5   NR MCE2764894.1 2497619 g11987 i0 48.1 0.968944099378882 52 26 96.9 1 6 161 68 118 MCE2764894.1 hypothetical protein [Ilumatobacteraceae bacterium] diamond 156 49.3 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales Ilumatobacteraceae   Ilumatobacteraceae bacterium
28654087 28654087 PRJNA380660_P_NODE_3607_length_433_cov_3.995050_g3219_i0 PRJNA380660 3607 433 3.99505 17.2985665 Cryptosporangium aurantiacum 134849 Bacteria Bacteria 43.9 0.0337   NR WP_073266257.1 134849 g3219 i0 30.2 0.665127020785219 96 62 65.8 3 365 81 15 106 WP_073266257.1 Zn-ribbon domain-containing OB-fold protein [Cryptosporangium aurantiacum] diamond 288 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Cryptosporangiales Cryptosporangiaceae Cryptosporangium Cryptosporangium aurantiacum
28748766 28748766 PRJNA380660_P_NODE_8967_length_226_cov_1.822335_g8567_i0 PRJNA380660 8967 226 1.822335 4.1184771 Chloroflexota bacterium 2026724 Bacteria Bacteria 66.6 2.72e-12   NR NLE46672.1 2026724 g8567 i0 48.6 1.72566371681416 70 35 91.6 1 224 18 21 90 NLE46672.1 30S ribosomal protein S17 [Chloroflexota bacterium] diamond 390 66.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28797143 28797143 PRJNA380660_P_NODE_8327_length_240_cov_2.184834_g7927_i0 PRJNA380660 8327 240 2.184834 5.2436016 Pseudonocardia 1847 Bacteria Bacteria 45.8 0.00298   NR WP_344418233.1 367279 g7927 i0 43.5 2.875 62 26 67.5 3 79 240 159 219 WP_344418233.1 FAD-dependent oxidoreductase [Pseudonocardia ailaonensis] diamond 690 45.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Pseudonocardia Pseudonocardia ailaonensis
29397263 29397263 PRJNA380660_P_NODE_4349_length_388_cov_2.069638_g3953_i0 PRJNA380660 4349 388 2.069638 8.03019544 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 139 2.0800000000000002e-36   NR WP_378058911.1 2044873 g3953 i0 56.8 11.9922680412371 125 51 95.1 3 12 380 239 362 WP_378058911.1 amino acid adenylation domain-containing protein [Actinophytocola glycyrrhizae] diamond 4653 139 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Actinophytocola Actinophytocola glycyrrhizae
29807617 29807617 PRJNA380660_P_NODE_11031_length_189_cov_1.606250_g10631_i0 PRJNA380660 11031 189 1.60625 3.0358125 Actinomycetota 201174 Bacteria Bacteria 47.4 2.82e-4   NR MBN2840643.1 2052159 g10631 i0 58.1 1.68253968253968 31 13 49.2 0 96 188 2 32 MBN2840643.1 FABP family protein [Coriobacteriia bacterium] diamond 318 47.8 0.99163179916318 Bacteria   Bacillati Actinomycetota Coriobacteriia       Coriobacteriia bacterium
30043353 30043353 PRJNA380660_P_NODE_9751_length_211_cov_2.648352_g9351_i0 PRJNA380660 9751 211 2.648352 5.58802272 Caldilineaceae bacterium 2614250 Bacteria Bacteria 73.2 3.4e-13   NR MEZ4659335.1 2614250 g9351 i0 51.4 1.02369668246445 72 31 99.5 2 210 1 188 257 MEZ4659335.1 hypothetical protein [Caldilineaceae bacterium] diamond 216 73.2 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
30959754 30959754 PRJNA380660_P_NODE_5974_length_313_cov_2.778169_g5574_i0 PRJNA380660 5974 313 2.778169 8.69566897 Sporolactobacillus laevolacticus 33018 Bacteria Bacteria 70.9 2.17e-12   NR WP_023509635.1 33018 g5574 i0 54 2.37699680511182 63 24 60.4 2 312 124 148 205 WP_023509635.1 superoxide dismutase [Sporolactobacillus laevolacticus] diamond 744 70.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Sporolactobacillaceae Sporolactobacillus Sporolactobacillus laevolacticus
31592183 31592183 PRJNA380660_P_NODE_7396_length_265_cov_2.364407_g6996_i0 PRJNA380660 7396 265 2.364407 6.26567855 Lawsonella clevelandensis 1528099 Bacteria Bacteria 174 2.48e-53   NR PZP88504.1 1528099 g6996 i0 98.9 2.98867924528302 88 1 99.6 0 264 1 30 117 PZP88504.1 MAG: nucleotide exchange factor GrpE [Lawsonella clevelandensis] diamond 792 174 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Lawsonellaceae Lawsonella Lawsonella clevelandensis
31939829 31939829 PRJNA380660_P_NODE_8217_length_242_cov_4.061033_g7817_i0 PRJNA380660 8217 242 4.061033 9.82769986 Actinomycetota bacterium 2900548 Bacteria Bacteria 75.9 8e-14   NR MCL4449639.1 2900548 g7817 i0 59.6 6.38429752066116 52 21 64.5 0 3 158 132 183 MCL4449639.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Actinomycetota bacterium] diamond 1545 75.9 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
32146893 32146893 PRJNA380660_P_NODE_5398_length_336_cov_2.508143_g4999_i0 PRJNA380660 5398 336 2.508143 8.42736048 root 1 Root_unresolved Root_unresolved 71.6 2.28e-13   NR WP_195452259.1 1624 g4999 i0 39.6 6.72321428571429 106 64 94.6 0 320 3 4 109 WP_195452259.1 30S ribosomal protein S13 [Ligilactobacillus salivarius] diamond 2259 72 0.994444444444444 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Ligilactobacillus salivarius
32635477 32635477 PRJNA380660_P_NODE_9900_length_209_cov_1.466667_g9500_i0 PRJNA380660 9900 209 1.466667 3.06533403 Geminocystis sp. GBBB 2664100 Bacteria Bacteria 58.9 8.5e-9   NR WP_308255855.1 2604140 g9500 i0 67.6 1.62200956937799 37 12 53.1 0 172 62 116 152 WP_308255855.1 hypothetical protein [Geminocystis sp. GBBB08] diamond 339 58.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Geminocystis Geminocystis sp. GBBB08
32761658 32761658 PRJNA380660_P_NODE_8220_length_242_cov_3.478873_g7820_i0 PRJNA380660 8220 242 3.478873 8.41887266 Streptococcus sp. 1306 Bacteria Bacteria 89.4 1.44e-18   NR RKW00080.1 1306 g7820 i0 71.3 0.991735537190083 80 23 99.2 0 2 241 356 435 RKW00080.1 MAG: SEC10/PgrA surface exclusion domain-containing protein, partial [Streptococcus sp.] diamond 240 89.4 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sp.
32904478 32904478 PRJNA380660_P_NODE_1460_length_702_cov_2.368499_g1156_i0 PRJNA380660 1460 702 2.368499 16.62686298 Bacillaceae 186817 Bacteria Bacteria 66.2 5.63e-9   NR WP_197140054.1 1421 g1156 i0 58.2 1.59401709401709 55 23 23.5 0 515 351 184 238 WP_197140054.1 AP2 domain-containing protein [Lysinibacillus sphaericus] diamond 1119 66.6 0.993993993993994 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Lysinibacillus Lysinibacillus sphaericus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;