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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA380660" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 23 ✖

bioproject 1

  • PRJNA380660 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6779993 6779993 PRJNA380660_P_NODE_7106_length_273_cov_4.409836_g6706_i0 PRJNA380660 7106 273 4.409836 12.03885228 Cupressales 1446379 Plants Plants 115 1.0600000000000002e-27   NR XP_057874035.2 3369 g6706 i0 66.7 1.64835164835165 90 9 98.9 1 272 3 120 188 XP_057874035.2 uncharacterized protein LOC131080002 [Cryptomeria japonica] diamond 450 115 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
7452187 7452187 PRJNA380660_P_NODE_11686_length_175_cov_1.835616_g11286_i0 PRJNA380660 11686 175 1.835616 3.212328 Eukaryota 2759 Plants Plants 97.1 8.049999999999999e-23   NR KAH9624809.1 39905 g11286 i0 77.6 28.8342857142857 58 13 99.4 0 2 175 89 146 KAH9624809.1 hypothetical protein KSS87_018125 [Heliosperma pusillum] diamond 5046 97.4 0.996919917864476 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Heliosperma Heliosperma pusillum
8726923 8726923 PRJNA380660_P_NODE_10147_length_205_cov_1.500000_g9747_i0 PRJNA380660 10147 205 1.5 3.075 Eukaryota 2759 Plants Plants 90.1 4.49e-19   NR KAF0920702.1 110450 g9747 i0 58.8 4.97560975609756 68 28 99.5 0 205 2 370 437 KAF0920702.1 hypothetical protein E2562_036405 [Oryza meyeriana var. granulata] diamond 1020 90.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza meyeriana
11880933 11880933 PRJNA380660_P_NODE_1730_length_645_cov_2.991883_g1408_i0 PRJNA380660 1730 645 2.991883 19.29764535 Poaceae 4479 Plants Plants 197 3.8499999999999996e-54   NR XP_048549226.1 4572 g1408 i0 54.2 34.3720930232558 212 80 95.3 7 645 31 1359 1560 XP_048549226.1 DNA-directed RNA polymerase II subunit RPB1-like [Triticum urartu] diamond 22170 197 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum urartu
13155985 13155985 PRJNA380660_P_NODE_2511_length_533_cov_2.543651_g2152_i0 PRJNA380660 2511 533 2.543651 13.55765983 Eukaryota 2759 Plants Plants 270 1.69e-89   NR NP_001365641.1 3218 g2152 i0 77.1 8.59474671669794 170 32 91.7 1 42 530 1 170 NP_001365641.1 60S ribosomal protein L15-1-like [Physcomitrium patens] diamond 4581 270 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
18253901 18253901 PRJNA380660_P_NODE_5735_length_323_cov_3.051020_g5336_i0 PRJNA380660 5735 323 3.05102 9.8547946 root 1 Root_unresolved Root_unresolved 147 1.7799999999999994e-42   NR BBH03815.1 3755 g5336 i0 78.5 60.7430340557276 93 18 84.5 1 28 300 66 158 BBH03815.1 SufE/NifU family protein [Prunus dulcis] diamond 19620 147 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus dulcis
26680421 26680421 PRJNA380660_P_NODE_3481_length_440_cov_4.102190_g3094_i0 PRJNA380660 3481 440 4.10219 18.049636 Viridiplantae 33090 Plants Plants 49.7 0.00118   NR KAI3924665.1 357465 g3094 i0 37.9 3.15681818181818 95 46 61.4 3 5 274 1106 1192 KAI3924665.1 hypothetical protein MKW92_052550 [Papaver armeniacum] diamond 1389 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver armeniacum
27154820 27154820 PRJNA380660_P_NODE_2182_length_573_cov_2.056985_g1841_i0 PRJNA380660 2182 573 2.056985 11.78652405 Eukaryota 2759 Plants Plants 88.2 3.52e-17   NR KAJ7514177.1 34168 g1841 i0 37.4 2.59162303664921 107 66 56 1 4 324 62 167 KAJ7514177.1 hypothetical protein O6H91_23G031800 [Diphasiastrum complanatum] diamond 1485 88.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Lycopodiopsida Lycopodiales Lycopodiaceae Diphasiastrum Diphasiastrum complanatum
27328008 27328008 PRJNA380660_P_NODE_10983_length_190_cov_1.503106_g10583_i0 PRJNA380660 10983 190 1.503106 2.8559014 Genlisea aurea 192259 Plants Plants 85.1 2.19e-19   NR EPS73337.1 192259 g10583 i0 64.9 23.5105263157895 57 20 90 0 20 190 45 101 EPS73337.1 hypothetical protein M569_01422, partial [Genlisea aurea] diamond 4467 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Lentibulariaceae Genlisea Genlisea aurea
28797142 28797142 PRJNA380660_P_NODE_6027_length_311_cov_1.833333_g5627_i0 PRJNA380660 6027 311 1.833333 5.70166563 Eukaryota 2759 Plants Plants 100 5.87e-22   NR XP_024188199.1 74649 g5627 i0 54.6 19.8617363344051 97 42 93.6 2 13 303 23 117 XP_024188199.1 probable ADP-ribosylation factor GTPase-activating protein AGD14 [Rosa chinensis] diamond 6177 101 0.99009900990099 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Rosa Rosa chinensis
29159436 29159436 PRJNA380660_P_NODE_1169_length_801_cov_2.913212_g902_i0 PRJNA380660 1169 801 2.913212 23.33482812 Quercus suber 58331 Plants Plants 48.1 0.0307   NR KAK7837842.1 58331 g902 i0 37.8 0.277153558052434 74 44 27 1 583 368 796 869 KAK7837842.1 regulator of telomere elongation helicase 1 like protein [Quercus suber] diamond 222 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus suber
29727282 29727282 PRJNA380660_P_NODE_12030_length_168_cov_2.136691_g11630_i0 PRJNA380660 12030 168 2.136691 3.58964088 Zingiber officinale 94328 Plants Plants 55.5 3.37e-7   NR XP_042391489.1 94328 g11630 i0 58.5 5.125 41 17 73.2 0 167 45 58 98 XP_042391489.1 putative HVA22-like protein g isoform X2 [Zingiber officinale] diamond 861 55.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Zingiberaceae Zingiber Zingiber officinale
30313727 30313727 PRJNA380660_P_NODE_12612_length_156_cov_2.078740_g12212_i0 PRJNA380660 12612 156 2.07874 3.2428344 Streptophyta 35493 Plants Plants 85.1 1.24e-17   NR KAG0599366.1 3225 g12212 i0 68.6 24.5192307692308 51 16 98.1 0 3 155 358 408 KAG0599366.1 hypothetical protein M758_12G146800 [Ceratodon purpureus] diamond 3825 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
30422976 30422976 PRJNA380660_P_NODE_9813_length_210_cov_2.309392_g9413_i0 PRJNA380660 9813 210 2.309392 4.8497232 Lithospermum erythrorhizon 34254 Plants Plants 42.4 0.0336   NR KAG9139972.1 34254 g9413 i0 40.8 0.7 49 28 68.6 1 28 171 370 418 KAG9139972.1 hypothetical protein Leryth_010497 [Lithospermum erythrorhizon] diamond 147 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Boraginales Boraginaceae Lithospermum Lithospermum erythrorhizon
30548900 30548900 PRJNA380660_P_NODE_4013_length_407_cov_2.034392_g3618_i0 PRJNA380660 4013 407 2.034392 8.27997544 Tripterygium wilfordii 458696 Plants Plants 97.1 4.290000000000001e-21   NR XP_038710395.1 458696 g3618 i0 42.3 2.97788697788698 130 45 95.1 3 406 20 197 297 XP_038710395.1 WD repeat-containing protein VIP3-like [Tripterygium wilfordii] diamond 1212 97.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Celastrales Celastraceae Tripterygium Tripterygium wilfordii
31197453 31197453 PRJNA380660_P_NODE_11675_length_175_cov_2.342466_g11275_i0 PRJNA380660 11675 175 2.342466 4.0993155 Eukaryota 2759 Plants Plants 103 2.65e-24   NR XP_030482642.1 3483 g11275 i0 87.3 69.8057142857143 55 7 94.3 0 9 173 270 324 XP_030482642.1 methionine aminopeptidase 2B isoform X2 [Cannabis sativa] diamond 12216 103 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
31338899 31338899 PRJNA380660_P_NODE_7856_length_252_cov_1.668161_g7456_i0 PRJNA380660 7856 252 1.668161 4.20376572 Cryptomeria japonica 3369 Plants Plants 80.5 8.27e-17   NR GLJ44752.1 3369 g7456 i0 58.3 0.857142857142857 72 27 85.7 1 221 6 1 69 GLJ44752.1 hypothetical protein SUGI_0941060 [Cryptomeria japonica] diamond 216 80.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
31451004 31451004 PRJNA380660_P_NODE_7576_length_260_cov_2.341991_g7176_i0 PRJNA380660 7576 260 2.341991 6.0891766 Eukaryota 2759 Plants Plants 47.4 8.87e-4   NR KAG9143141.1 34254 g7176 i0 40 3.11538461538462 55 32 63.5 1 8 172 126 179 KAG9143141.1 hypothetical protein Leryth_024161 [Lithospermum erythrorhizon] diamond 810 47.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Boraginales Boraginaceae Lithospermum Lithospermum erythrorhizon
32020322 32020322 PRJNA380660_P_NODE_6598_length_291_cov_1.599237_g6198_i0 PRJNA380660 6598 291 1.599237 4.65377967 root 1 Root_unresolved Root_unresolved 48.1 7.85e-4   NR XP_050214808.1 3986 g6198 i0 41.4 6.12371134020619 58 25 50.5 1 251 105 244 301 XP_050214808.1 RHOMBOID-like protein 1 [Mercurialis annua] diamond 1782 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Mercurialis Mercurialis annua
32146894 32146894 PRJNA380660_P_NODE_8078_length_246_cov_1.949309_g7678_i0 PRJNA380660 8078 246 1.949309 4.79530014 Eukaryota 2759 Plants Plants 58.2 1.38e-7   NR OAY66175.1 4615 g7678 i0 55.6 6.70731707317073 45 20 54.9 0 241 107 97 141 OAY66175.1 Protein REVEILLE 1 [Ananas comosus] diamond 1650 58.5 0.994871794871795 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Bromeliaceae Ananas Ananas comosus
32446451 32446451 PRJNA380660_P_NODE_799_length_976_cov_4.071806_g594_i0 PRJNA380660 799 976 4.071806 39.74082656 Amaranthus tricolor 29722 Plants Plants 71.2 1.34e-9   NR XP_057535902.1 29722 g594 i0 37.7 0.350409836065574 114 59 31.4 2 671 976 3 116 XP_057535902.1 importin subunit alpha-like [Amaranthus tricolor] diamond 342 71.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Amaranthaceae Amaranthus Amaranthus tricolor
32495046 32495046 PRJNA380660_P_NODE_10439_length_200_cov_2.023392_g10039_i0 PRJNA380660 10439 200 2.023392 4.046784 Magnoliopsida 3398 Plants Plants 43.9 0.00815   NR KMZ59149.1 29655 g10039 i0 54.8 2.34 42 19 63 0 198 73 333 374 KMZ59149.1 COP9 signalosome complex subunit 4, partial [Zostera marina] diamond 468 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Alismatales Zosteraceae Zostera Zostera marina
32635476 32635476 PRJNA380660_P_NODE_4400_length_385_cov_3.064607_g4004_i0 PRJNA380660 4400 385 3.064607 11.79873695 Eleusine coracana subsp. coracana 191504 Plants Plants 67.4 3.27e-10   NR KAK3166043.1 191504 g4004 i0 33.3 3.09350649350649 102 56 76.4 3 1 294 243 336 KAK3166043.1 hypothetical protein QOZ80_1AG0040810 [Eleusine coracana subsp. coracana] diamond 1191 67.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Eleusine Eleusine coracana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;