RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA380416" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA380416 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28559484 28559484 PRJNA380416_P_NODE_13487_length_162_cov_0.902655_g13340_i0 PRJNA380416 13487 162 0.902655 1.4623011 Caudoviricetes sp. 2832643 Viruses Viruses 46.6 5.55e-4   NR XOQ89895.1 2832643 g13340 i0 45.8 0.888888888888889 48 26 88.9 0 1 144 174 221 XOQ89895.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 144 46.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28906443 28906443 PRJNA380416_P_NODE_9848_length_181_cov_1.545455_g9701_i0 PRJNA380416 9848 181 1.545455 2.79727355 Caudoviricetes sp. 2832643 Viruses Viruses 81.3 4.28e-16   NR XOS43009.1 2832643 g9701 i0 71.7 0.994475138121547 60 17 99.4 0 181 2 140 199 XOS43009.1 MAG: tail fiber protein [Caudoviricetes sp.] diamond 180 81.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29222569 29222569 PRJNA380416_P_NODE_12249_length_165_cov_0.879310_g12102_i0 PRJNA380416 12249 165 0.87931 1.4508615 Sphingobium phage Lacusarx 1980139 Viruses Viruses 48.9 8.54e-5   NR YP_009600753.1 1980139 g12102 i0 52.3 0.8 44 20 78.2 1 36 164 927 970 YP_009600753.1 tail protein [Sphingobium phage Lacusarx] diamond 132 48.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lacusarxvirus Lacusarxvirus lacusarx
30675196 30675196 PRJNA380416_P_NODE_9013_length_190_cov_1.042553_g8866_i0 PRJNA380416 9013 190 1.042553 1.9808507 Acidovorax phage ACP17 2010329 Viruses Viruses 66.6 3.29e-11   NR YP_009609729.1 2010329 g8866 i0 47.6 0.994736842105263 63 33 99.5 0 189 1 11 73 YP_009609729.1 baseplate hub assembly chaperone [Acidovorax phage ACP17] diamond 189 66.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Busanvirus Busanvirus ACP17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;