RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA380416" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30106493 30106493 PRJNA380416_P_NODE_7332_length_212_cov_0.938650_g7185_i0 PRJNA380416 7332 212 0.93865 1.989938 Dysidea avara 196820 Porifera other_Eukaryota 90.9 2.79e-19   NR XP_065898028.1 196820 g7185 i0 61.4 3.9622641509434 70 27 99.1 0 1 210 1655 1724 XP_065898028.1 phospholipid-transporting ATPase ABCA3-like [Dysidea avara] diamond 840 90.9 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
30913664 30913664 PRJNA380416_P_NODE_6354_length_228_cov_1.139665_g6207_i0 PRJNA380416 6354 228 1.139665 2.5984362 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.1 0.022   NR CAI8032194.1 519541 g6207 i0 43.3 1.72368421052632 60 28 78.9 2 48 227 18 71 CAI8032194.1 hypothetical protein GBAR_LOCUS18222 [Geodia barretti] diamond 393 43.1 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;