RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA380416" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA380416 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27959385 27959385 PRJNA380416_P_NODE_4705_length_270_cov_1.674208_g4558_i0 PRJNA380416 4705 270 1.674208 4.5203616 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 162 1.24e-49   NR MBX9692690.1 2847862 g4558 i0 86.9 0.933333333333333 84 11 93.3 0 269 18 34 117 MBX9692690.1 (2Fe-2S)-binding protein [Cyanobacteriota bacterium] diamond 252 162 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium
30422968 30422968 PRJNA380416_P_NODE_3173_length_338_cov_0.878893_g3026_i0 PRJNA380416 3173 338 0.878893 2.97065834 Pantanalinema sp. 3088176 Bacteria Bacteria 57.4 8.2e-7   NR HEY9897812.1 3088176 g3026 i0 33.3 0.958579881656805 108 68 92.3 2 313 2 548 655 HEY9897812.1 5-histidylcysteine sulfoxide synthase [Pantanalinema sp.] diamond 324 57.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Pantanalinema Pantanalinema sp.
32698572 32698572 PRJNA380416_P_NODE_260_length_1214_cov_2.544206_g195_i0 PRJNA380416 260 1214 2.544206 30.88666084 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 459 9.74e-159   NR MBX9694561.1 2847862 g195 i0 73.1 2.40939044481054 308 78 74.9 2 46 954 15 322 MBX9694561.1 hypothetical protein [Cyanobacteriota bacterium] diamond 2925 459 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;