contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA380416" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15704726 | 15704726 | PRJNA380416_P_NODE_13753_length_161_cov_0.910714_g13606_i0 | PRJNA380416 | 13753 | 161 | 0.910714 | 1.46624954 | Leifsonia sp. TF | 1870902 | Bacteria | Bacteria | 100 | 5.519999999999999e-23 | NR | WP_208039097.1 | 2815212 | g13606 | i0 | 98.1 | 0.987577639751553 | 53 | 1 | 98.8 | 0 | 2 | 160 | 485 | 537 | WP_208039097.1 magnesium-translocating P-type ATPase [Leifsonia sp. TF02-11] | diamond | 159 | 100 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia sp. TF02-11 | ||
| 27296277 | 27296277 | PRJNA380416_P_NODE_13483_length_162_cov_0.902655_g13336_i0 | PRJNA380416 | 13483 | 162 | 0.902655 | 1.4623011 | Mycobacterium sp. | 1785 | Bacteria | Bacteria | 113 | 3.5199999999999995e-31 | NR | MBI3217013.1 | 1785 | g13336 | i0 | 96.2 | 0.981481481481482 | 53 | 2 | 98.1 | 0 | 160 | 2 | 7 | 59 | MBI3217013.1 hypothetical protein [Mycobacterium sp.] | diamond | 159 | 113 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. | ||
| 27738742 | 27738742 | PRJNA380416_P_NODE_13104_length_163_cov_0.894737_g12957_i0 | PRJNA380416 | 13104 | 163 | 0.894737 | 1.45842131 | Kitasatospora sp. NPDC | 1871188 | Bacteria | Bacteria | 66.2 | 6.51e-11 | NR | WP_401088305.1 | 3364085 | g12957 | i0 | 63.4 | 14.0981595092025 | 41 | 15 | 75.5 | 0 | 40 | 162 | 760 | 800 | WP_401088305.1 non-ribosomal peptide synthetase [Kitasatospora sp. NPDC091335] | diamond | 2298 | 66.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora sp. NPDC091335 | ||
| 28180220 | 28180220 | PRJNA380416_P_NODE_11946_length_165_cov_3.250000_g11799_i0 | PRJNA380416 | 11946 | 165 | 3.25 | 5.3625 | Gaiellaceae bacterium | 2838783 | Bacteria | Bacteria | 42 | 0.0228 | NR | HST17223.1 | 2838783 | g11799 | i0 | 59 | 0.709090909090909 | 39 | 14 | 67.3 | 2 | 47 | 157 | 42 | 80 | HST17223.1 hypothetical protein [Gaiellaceae bacterium] | diamond | 117 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Gaiellales | Gaiellaceae | Gaiellaceae bacterium | |||
| 28401469 | 28401469 | PRJNA380416_P_NODE_9666_length_183_cov_1.783582_g9519_i0 | PRJNA380416 | 9666 | 183 | 1.783582 | 3.26395506 | Nocardioides pantholopis | 2483798 | Bacteria | Bacteria | 62.4 | 1.77e-9 | NR | WP_127479640.1 | 2483798 | g9519 | i0 | 72.7 | 0.540983606557377 | 33 | 9 | 54.1 | 0 | 182 | 84 | 317 | 349 | WP_127479640.1 glycoside hydrolase family 99-like domain-containing protein [Nocardioides pantholopis] | diamond | 99 | 62.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides pantholopis | ||
| 29411732 | 29411732 | PRJNA380416_P_NODE_6649_length_223_cov_0.741379_g6502_i0 | PRJNA380416 | 6649 | 223 | 0.741379 | 1.65327517 | Rhodococcus erythropolis | 1833 | Bacteria | Bacteria | 43.1 | 0.0203 | NR | KAB2584130.1 | 1833 | g6502 | i0 | 42.6 | 0.726457399103139 | 54 | 26 | 67.3 | 2 | 63 | 212 | 373 | 425 | KAB2584130.1 DUF2029 domain-containing protein [Rhodococcus erythropolis] | diamond | 162 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus erythropolis | ||
| 30391446 | 30391446 | PRJNA380416_P_NODE_12313_length_165_cov_0.879310_g12166_i0 | PRJNA380416 | 12313 | 165 | 0.87931 | 1.4508615 | Pseudoclavibacter sp. | 1915061 | Bacteria | Bacteria | 57.8 | 6.26e-8 | NR | HHW50484.1 | 1915061 | g12166 | i0 | 91.4 | 0.636363636363636 | 35 | 3 | 63.6 | 0 | 59 | 163 | 1 | 35 | HHW50484.1 hypothetical protein [Pseudoclavibacter sp.] | diamond | 105 | 57.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Pseudoclavibacter | Pseudoclavibacter sp. | ||
| 31117398 | 31117398 | PRJNA380416_P_NODE_14275_length_154_cov_2.238095_g14128_i0 | PRJNA380416 | 14275 | 154 | 2.238095 | 3.4466663 | Nocardioides sp. | 35761 | Bacteria | Bacteria | 55.1 | 4.68e-7 | NR | WP_324499474.1 | 35761 | g14128 | i0 | 58.7 | 0.896103896103896 | 46 | 19 | 89.6 | 0 | 3 | 140 | 103 | 148 | WP_324499474.1 hypothetical protein [Nocardioides sp.] | diamond | 138 | 55.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. | ||
| 31433772 | 31433772 | PRJNA380416_P_NODE_5976_length_236_cov_0.925134_g5829_i0 | PRJNA380416 | 5976 | 236 | 0.925134 | 2.18331624 | Nocardia asteroides | 1824 | Bacteria | Bacteria | 40.8 | 0.0374 | NR | WP_378807785.1 | 1824 | g5829 | i0 | 51.2 | 0.546610169491525 | 43 | 21 | 54.7 | 0 | 145 | 17 | 36 | 78 | WP_378807785.1 hypothetical protein, partial [Nocardia asteroides] | diamond | 129 | 40.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Nocardia | Nocardia asteroides | ||
| 32856052 | 32856052 | PRJNA380416_P_NODE_3000_length_348_cov_0.775920_g2853_i0 | PRJNA380416 | 3000 | 348 | 0.77592 | 2.7002016 | Actinomycetes bacterium | 1883427 | Bacteria | Bacteria | 48.1 | 0.00148 | NR | MDO5286548.1 | 1883427 | g2853 | i0 | 32.4 | 0.586206896551724 | 68 | 45 | 57.8 | 1 | 229 | 29 | 154 | 221 | MDO5286548.1 ABC transporter permease [Actinomycetes bacterium] | diamond | 204 | 48.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetes bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;