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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA379145" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA379145 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8054331 8054331 PRJNA379145_P_NODE_6287_length_1211_cov_2.252122_g5523_i0 PRJNA379145 6287 1211 2.252122 27.27319742 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 575 1.5599999999999995e-202   NR YP_009136572.1 1194616 g5523 i0 94 0.832369942196532 336 16 83.2 1 202 1209 73 404 YP_009136572.1 NADH dehydrogenase subunit 4 [Lepidodermella squamata] diamond 1008 575 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
13154545 13154545 PRJNA379145_P_NODE_34131_length_362_cov_2.817629_g31986_i0 PRJNA379145 34131 362 2.817629 10.19981698 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 214 3.25e-67   NR YP_009136568.1 1194616 g31986 i0 94.7 0.94475138121547 114 6 94.5 0 1 342 173 286 YP_009136568.1 NADH dehydrogenase subunit 1 [Lepidodermella squamata] diamond 342 214 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
27359582 27359582 PRJNA379145_P_NODE_32163_length_386_cov_2.277620_g30028_i0 PRJNA379145 32163 386 2.27762 8.7916132 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 93.6 6.92e-20   NR YP_009136579.1 1194616 g30028 i0 63.5 0.660621761658031 85 7 47.4 1 138 320 28 112 YP_009136579.1 NADH dehydrogenase subunit 2 [Lepidodermella squamata] diamond 255 93.6 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
28906369 28906369 PRJNA379145_P_NODE_37268_length_328_cov_2.155932_g35118_i0 PRJNA379145 37268 328 2.155932 7.07145696 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 135 8.95e-39   NR YP_009136578.1 1194616 g35118 i0 90.5 0.676829268292683 74 7 67.7 0 310 89 1 74 YP_009136578.1 NADH dehydrogenase subunit 3 [Lepidodermella squamata] diamond 222 135 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
29569583 29569583 PRJNA379145_P_NODE_58490_length_194_cov_4.968944_g56336_i0 PRJNA379145 58490 194 4.968944 9.63975136 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 111 1.04e-26   NR YP_009136573.1 1194616 g56336 i0 81.3 0.989690721649485 64 12 99 0 194 3 470 533 YP_009136573.1 NADH dehydrogenase subunit 5 [Lepidodermella squamata] diamond 192 111 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
30391349 30391349 PRJNA379145_P_NODE_23113_length_530_cov_2.450704_g21138_i0 PRJNA379145 23113 530 2.450704 12.9887312 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 298 3.069999999999999e-96   NR YP_009136573.1 1194616 g21138 i0 88.6 0.99622641509434 176 20 99.6 0 1 528 238 413 YP_009136573.1 NADH dehydrogenase subunit 5 [Lepidodermella squamata] diamond 528 298 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;