RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA379145" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA379145 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2951276 2951276 PRJNA379145_P_NODE_1983_length_1895_cov_15.844253_g1695_i0 PRJNA379145 1983 1895 15.844253 300.24859435 Cressdnaviricota sp. 2748378 Viruses Viruses 403 1.1399999999999999e-133   NR WAE42375.1 2748378 g1695 i0 67.9 0.424274406332454 268 86 42.4 0 975 1778 12 279 WAE42375.1 MAG: replication associated protein [Cressdnaviricota sp.] diamond 804 403 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
30328259 30328259 PRJNA379145_P_NODE_58292_length_195_cov_2.179012_g56138_i0 PRJNA379145 58292 195 2.179012 4.2490734 Circoviridae sp. 1954248 Viruses Viruses 67 7.21e-13   NR UOF78025.1 1954248 g56138 i0 46 0.969230769230769 63 34 96.9 0 2 190 4 66 UOF78025.1 hypothetical protein [Circoviridae sp.] diamond 189 67 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
31022869 31022869 PRJNA379145_P_NODE_4175_length_1442_cov_70.339957_g3645_i0 PRJNA379145 4175 1442 70.339957 1014.30217994 Lactuca sativa CRESS virus 2709779 Viruses Viruses 266 2.4699999999999995e-82   NR QIN94950.1 2709779 g3645 i0 68.3 0.393203883495146 189 60 39.3 0 600 34 93 281 QIN94950.1 MAG: capsid protein [Lactuca sativa CRESS virus] diamond 567 266 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Lactuca sativa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;