RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA379145" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA379145 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27770098 27770098 PRJNA379145_P_NODE_15464_length_720_cov_1.799127_g13824_i0 PRJNA379145 15464 720 1.799127 12.9537144 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 50.1 0.00468   NR MEO2003345.1 2026781 g13824 i0 28.3 0.604166666666667 145 93 57.9 4 623 207 3 142 MEO2003345.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 435 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27896135 27896135 PRJNA379145_P_NODE_54685_length_210_cov_1.757062_g52531_i0 PRJNA379145 54685 210 1.757062 3.6898302 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 58.5 6.33e-8   NR MXY99617.1 2026781 g52531 i0 51.7 2.42857142857143 58 28 82.9 0 175 2 555 612 MXY99617.1 transketolase [Candidatus Poribacteria bacterium] diamond 510 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30485757 30485757 PRJNA379145_P_NODE_50473_length_231_cov_1.484848_g48319_i0 PRJNA379145 50473 231 1.484848 3.42999888 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 133 3.909999999999999e-35   NR MFC1713698.1 2026781 g48319 i0 76.6 5.92207792207792 77 18 100 0 231 1 153 229 MFC1713698.1 Gfo/Idh/MocA family protein [Candidatus Poribacteria bacterium] diamond 1368 133 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31450983 31450983 PRJNA379145_P_NODE_36616_length_335_cov_1.142384_g34468_i0 PRJNA379145 36616 335 1.142384 3.8269864 root 1 Root_unresolved Root_unresolved 48.9 4.33e-4   NR MBI1924889.1 2026781 g34468 i0 44.7 1.41492537313433 47 26 42.1 0 71 211 1 47 MBI1924889.1 tetratricopeptide repeat protein [Candidatus Poribacteria bacterium] diamond 474 49.3 0.991886409736308 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;