RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA379145" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA379145 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28148894 28148894 PRJNA379145_P_NODE_15425_length_721_cov_3.309593_g13788_i0 PRJNA379145 15425 721 3.309593 23.86216553 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 99 6.92e-20   NR MEA2096298.1 2030808 g13788 i0 32.8 0.990291262135922 238 145 98.2 6 1 708 217 441 MEA2096298.1 DUF4139 domain-containing protein [Candidatus Cloacimonadota bacterium] diamond 714 99 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32904466 32904466 PRJNA379145_P_NODE_57060_length_200_cov_1.916168_g54906_i0 PRJNA379145 57060 200 1.916168 3.832336 FCB group 1783270 Bacteria Bacteria 43.9 0.00838   NR PKN74967.1 2013734 g54906 i0 40.4 3.405 57 33 85.5 1 200 30 547 602 PKN74967.1 MAG: ATP-dependent helicase [Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-2] diamond 681 43.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;