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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA376117" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA376117 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8052900 8052900 PRJNA376117_P_NODE_13187_length_375_cov_1.374172_g12885_i0 PRJNA376117 13187 375 1.374172 5.153145 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 181 1.03e-51   NR RYD60109.1 2026800 g12885 i0 74.4 2 125 32 100 0 375 1 137 261 RYD60109.1 MAG: hypothetical protein EOP83_20225 [Verrucomicrobiaceae bacterium] diamond 750 181 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
26870837 26870837 PRJNA376117_P_NODE_28101_length_272_cov_1.140704_g27799_i0 PRJNA376117 28101 272 1.140704 3.10271488 Bacteria 2 Bacteria Bacteria 45.4 0.00569   NR MDP4643832.1 2026772 g27799 i0 39.7 3.19852941176471 58 35 64 0 233 60 2 59 MDP4643832.1 glycosyltransferase [Opitutales bacterium] diamond 870 45.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
28117042 28117042 PRJNA376117_P_NODE_27985_length_272_cov_1.542714_g27683_i0 PRJNA376117 27985 272 1.542714 4.19618208 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 58.9 1.07e-7   NR HUA62969.1 2499141 g27683 i0 43.6 0.860294117647059 78 37 86 2 255 22 773 843 HUA62969.1 family 78 glycoside hydrolase catalytic domain [Verrucomicrobiia bacterium] diamond 234 58.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28622477 28622477 PRJNA376117_P_NODE_17787_length_328_cov_0.905882_g17485_i0 PRJNA376117 17787 328 0.905882 2.97129296 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 65.5 4.71e-10   NR RYD62543.1 2026800 g17485 i0 61.4 0.402439024390244 44 17 40.2 0 194 325 1 44 RYD62543.1 MAG: hypothetical protein EOP83_14325 [Verrucomicrobiaceae bacterium] diamond 132 65.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30517240 30517240 PRJNA376117_P_NODE_8333_length_464_cov_2.529412_g8031_i0 PRJNA376117 8333 464 2.529412 11.73647168 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 59.3 4.91e-8   NR MDA0321252.1 2026799 g8031 i0 56.9 0.65948275862069 51 22 33 0 463 311 72 122 MDA0321252.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 306 59.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31387771 31387771 PRJNA376117_P_NODE_29036_length_268_cov_2.087179_g28734_i0 PRJNA376117 29036 268 2.087179 5.59363972 Bacteria 2 Bacteria Bacteria 69.3 2.23e-11   NR MEI6074512.1 2026799 g28734 i0 58.5 2.21641791044776 53 22 59.3 0 267 109 63 115 MEI6074512.1 kelch repeat-containing protein [Verrucomicrobiota bacterium] diamond 594 69.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32129884 32129884 PRJNA376117_P_NODE_39378_length_246_cov_0.890173_g39076_i0 PRJNA376117 39378 246 0.890173 2.18982558 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 53.1 1.32e-6   NR RYD61498.1 2026800 g39076 i0 55.6 0.548780487804878 45 20 54.9 0 23 157 63 107 RYD61498.1 MAG: hypothetical protein EOP83_16875, partial [Verrucomicrobiaceae bacterium] diamond 135 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32256618 32256618 PRJNA376117_P_NODE_29058_length_268_cov_1.815385_g28756_i0 PRJNA376117 29058 268 1.815385 4.8652318 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 126 1.01e-31   NR RYD60109.1 2026800 g28756 i0 76.5 1.77985074626866 81 19 90.7 0 267 25 5 85 RYD60109.1 MAG: hypothetical protein EOP83_20225 [Verrucomicrobiaceae bacterium] diamond 477 126 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32400073 32400073 PRJNA376117_P_NODE_41699_length_244_cov_0.894737_g41397_i0 PRJNA376117 41699 244 0.894737 2.18315828 Pseudomonadati 3379134 Bacteria Bacteria 122 6.19e-34   NR MFP4542229.1 2026772 g41397 i0 73.8 2.95081967213115 80 21 98.4 0 3 242 17 96 MFP4542229.1 VTT domain-containing protein [Opitutales bacterium] diamond 720 123 0.991869918699187 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;