RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA376117" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28590895 28590895 PRJNA376117_P_NODE_13487_length_372_cov_1.023411_g13185_i0 PRJNA376117 13487 372 1.023411 3.80708892 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 127 3.44e-33   NR MES1913540.1 1215613 g13185 i0 52 3.06451612903226 125 55 97.6 2 8 370 43 166 MES1913540.1 hypothetical protein [Cercozoa sp. M6MM] diamond 1140 127 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
29727154 29727154 PRJNA376117_P_NODE_37890_length_247_cov_1.327586_g37588_i0 PRJNA376117 37890 247 1.327586 3.27913742 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 123 4.1e-32   NR MES1915219.1 1215613 g37588 i0 68.3 3.91093117408907 82 26 99.6 0 1 246 56 137 MES1915219.1 hypothetical protein [Cercozoa sp. M6MM] diamond 966 123 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;