RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA376117" and tax_phylum = "Candidatus Roizmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15702563 15702563 PRJNA376117_P_NODE_25413_length_281_cov_1.480769_g25111_i0 PRJNA376117 25413 281 1.480769 4.16096089 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 109 2.4e-28   NR MFS8159965.1 2282149 g25111 i0 62.4 0.99288256227758 93 27 90.7 2 17 271 18 110 MFS8159965.1 DnaJ domain-containing protein [Candidatus Roizmanbacteria bacterium] diamond 279 109 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
32288211 32288211 PRJNA376117_P_NODE_10539_length_414_cov_1.806452_g10237_i0 PRJNA376117 10539 414 1.806452 7.47871128 Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_ 2282149 Bacteria Bacteria 143 3.9e-40   NR OGK23546.1 1802039 g10237 i0 52.2 1.89130434782609 134 64 97.1 0 409 8 54 187 OGK23546.1 MAG: hypothetical protein A3C25_05655 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11] diamond 783 143 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;