contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA371613" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27801552 | 27801552 | PRJNA371613_P_NODE_6264_length_184_cov_3.285714_g6088_i0 | PRJNA371613 | 6264 | 184 | 3.285714 | 6.04571376 | Corynebacterium macclintockiae | 2913501 | Bacteria | Bacteria | 82 | 2.44e-16 | NR | WP_284819838.1 | 2913501 | g6088 | i0 | 62.3 | 0.994565217391304 | 61 | 23 | 99.5 | 0 | 2 | 184 | 511 | 571 | WP_284819838.1 AAA family ATPase [Corynebacterium macclintockiae] | diamond | 183 | 82 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium macclintockiae | ||
| 28053896 | 28053896 | PRJNA371613_P_NODE_5265_length_207_cov_1.052941_g5089_i0 | PRJNA371613 | 5265 | 207 | 1.052941 | 2.17958787 | Gordonia prachuapensis | 3115651 | Bacteria | Bacteria | 42.4 | 0.0317 | NR | WP_330503865.1 | 3115651 | g5089 | i0 | 34.3 | 1.01449275362319 | 70 | 29 | 76.8 | 2 | 207 | 49 | 191 | 260 | WP_330503865.1 serine/threonine dehydratase [Gordonia prachuapensis] | diamond | 210 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Gordoniaceae | Gordonia | Gordonia prachuapensis | ||
| 28274918 | 28274918 | PRJNA371613_P_NODE_7766_length_169_cov_0.969697_g7590_i0 | PRJNA371613 | 7766 | 169 | 0.969697 | 1.63878793 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 91.3 | 7.720000000000001e-21 | NR | MEW6635680.1 | 2900548 | g7590 | i0 | 73.2 | 1.98816568047337 | 56 | 15 | 99.4 | 0 | 169 | 2 | 163 | 218 | MEW6635680.1 type I-C CRISPR-associated protein Cas5c [Actinomycetota bacterium] | diamond | 336 | 91.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 28906297 | 28906297 | PRJNA371613_P_NODE_8168_length_167_cov_0.984615_g7992_i0 | PRJNA371613 | 8168 | 167 | 0.984615 | 1.64430705 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 45.8 | 0.00103 | NR | MSV94700.1 | 2900548 | g7992 | i0 | 96 | 0.916167664670659 | 25 | 1 | 44.9 | 0 | 91 | 165 | 1 | 25 | MSV94700.1 SDR family NAD(P)-dependent oxidoreductase [Actinomycetota bacterium] | diamond | 153 | 45.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 29790366 | 29790366 | PRJNA371613_P_NODE_7731_length_169_cov_0.969697_g7555_i0 | PRJNA371613 | 7731 | 169 | 0.969697 | 1.63878793 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 117 | 5.51e-31 | NR | WP_138223578.1 | 1747 | g7555 | i0 | 91.1 | 0.994082840236686 | 56 | 5 | 99.4 | 0 | 168 | 1 | 70 | 125 | WP_138223578.1 HNH endonuclease family protein [Cutibacterium acnes] | diamond | 168 | 117 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 30706706 | 30706706 | PRJNA371613_P_NODE_5834_length_192_cov_1.258065_g5658_i0 | PRJNA371613 | 5834 | 192 | 1.258065 | 2.4154848 | Actinomadura rudentiformis | 359158 | Bacteria | Bacteria | 42.4 | 0.0241 | NR | WP_151569518.1 | 359158 | g5658 | i0 | 41.5 | 0.640625 | 41 | 22 | 60.9 | 1 | 29 | 145 | 164 | 204 | WP_151569518.1 PQQ-binding-like beta-propeller repeat protein [Actinomadura rudentiformis] | diamond | 123 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Thermomonosporaceae | Actinomadura | Actinomadura rudentiformis | ||
| 30770109 | 30770109 | PRJNA371613_P_NODE_8794_length_164_cov_1.007874_g8618_i0 | PRJNA371613 | 8794 | 164 | 1.007874 | 1.65291336 | Dietzia cercidiphylli | 498199 | Bacteria | Bacteria | 115 | 1.03e-29 | NR | WP_338404243.1 | 498199 | g8618 | i0 | 98.1 | 0.98780487804878 | 54 | 1 | 98.8 | 0 | 3 | 164 | 15 | 68 | WP_338404243.1 biliverdin-producing heme oxygenase [Dietzia cercidiphylli] | diamond | 162 | 115 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia | Dietzia cercidiphylli | ||
| 31433642 | 31433642 | PRJNA371613_P_NODE_9216_length_162_cov_1.024000_g9040_i0 | PRJNA371613 | 9216 | 162 | 1.024 | 1.65888 | Corynebacterium casei | 160386 | Bacteria | Bacteria | 89.4 | 4.58e-21 | NR | MDN5784609.1 | 160386 | g9040 | i0 | 94.3 | 1.96296296296296 | 53 | 3 | 98.1 | 0 | 3 | 161 | 90 | 142 | MDN5784609.1 helix-hairpin-helix domain-containing protein [Corynebacterium casei] | diamond | 318 | 89.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium casei | ||
| 31830195 | 31830195 | PRJNA371613_P_NODE_7917_length_168_cov_0.977099_g7741_i0 | PRJNA371613 | 7917 | 168 | 0.977099 | 1.64152632 | Acidimicrobiales | 84993 | Bacteria | Bacteria | 59.7 | 6.39e-9 | NR | KRO42972.1 | 1655566 | g7741 | i0 | 100 | 1.55357142857143 | 29 | 0 | 51.8 | 0 | 167 | 81 | 189 | 217 | KRO42972.1 MAG: hypothetical protein ABR58_06590 [Acidimicrobium sp. BACL19 MAG-120924-bin39] | diamond | 261 | 59.7 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiaceae | Acidimicrobium | Acidimicrobium sp. BACL19 MAG-120924-bin39 | ||
| 32855904 | 32855904 | PRJNA371613_P_NODE_6560_length_179_cov_1.626761_g6384_i0 | PRJNA371613 | 6560 | 179 | 1.626761 | 2.91190219 | unclassified Dietzia | 2617939 | Bacteria | Bacteria | 124 | 5.05e-34 | NR | WP_069388984.1 | 2617939 | g6384 | i0 | 100 | 0.988826815642458 | 59 | 0 | 98.9 | 0 | 3 | 179 | 17 | 75 | WP_069388984.1 MULTISPECIES: hypothetical protein [unclassified Dietzia] | diamond | 177 | 124 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;