RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA371613" and tax_kingdom = "Metazoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 4

tax_superkingdom 1

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA371613 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27707115 27707115 PRJNA371613_P_NODE_9124_length_162_cov_1.464000_g8948_i0 PRJNA371613 9124 162 1.464 2.37168 Orcinus orca 9733 Chordata Chordata 42.7 0.0124   NR XP_004267183.2 9733 g8948 i0 59 0.722222222222222 39 11 63 1 23 124 34 72 XP_004267183.2 forkhead box protein N1 isoform X2 [Orcinus orca] diamond 117 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
27832914 27832914 PRJNA371613_P_NODE_7444_length_170_cov_3.120301_g7268_i0 PRJNA371613 7444 170 3.120301 5.3045117 Aphelenchoides avenae 70226 Nematoda Nematoda 52.4 5.24e-6   NR KAH7724289.1 70226 g7268 i0 60 1.69411764705882 40 13 70.6 1 141 22 213 249 KAH7724289.1 protein Y94A7B.2 [Aphelenchoides avenae] diamond 288 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
28544922 28544922 PRJNA371613_P_NODE_7347_length_171_cov_0.955224_g7171_i0 PRJNA371613 7347 171 0.955224 1.63343304 root 1 Root_unresolved Root_unresolved 52.4 5.5e-6   NR CAH1787164.1 6347 g7171 i0 37.7 1.78947368421053 53 33 93 0 8 166 497 549 CAH1787164.1 unnamed protein product [Owenia fusiformis] diamond 306 52.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
30264768 30264768 PRJNA371613_P_NODE_5292_length_206_cov_1.461538_g5116_i0 PRJNA371613 5292 206 1.461538 3.01076828 Hypanus sabinus 79690 Chordata Chordata 61.2 6.84e-9   NR XP_059823631.1 79690 g5116 i0 46 0.728155339805825 50 27 72.8 0 169 20 558 607 XP_059823631.1 IQ calmodulin-binding motif-containing protein 1 isoform X1 [Hypanus sabinus] diamond 150 61.2 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Myliobatiformes Dasyatidae Hypanus Hypanus sabinus
31022789 31022789 PRJNA371613_P_NODE_6775_length_175_cov_1.855072_g6599_i0 PRJNA371613 6775 175 1.855072 3.246376 Trichonephila clavipes 2585209 Arthropoda Arthropoda 45.4 0.00106   NR GFS73109.1 2585209 g6599 i0 30.6 1.23428571428571 72 33 94.3 2 175 11 86 157 GFS73109.1 transposable element Tc1 transposase [Trichonephila clavipes] diamond 216 45.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Trichonephila Trichonephila clavipes
32034778 32034778 PRJNA371613_P_NODE_8798_length_164_cov_1.007874_g8622_i0 PRJNA371613 8798 164 1.007874 1.65291336 Rousettus aegyptiacus 9407 Chordata Chordata 43.5 0.00268   NR KAF6427968.1 9407 g8622 i0 56.4 2.85365853658537 39 12 69.5 2 47 160 75 109 KAF6427968.1 hypothetical protein HJG63_008428 [Rousettus aegyptiacus] diamond 468 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
32129864 32129864 PRJNA371613_P_NODE_8298_length_166_cov_0.992248_g8122_i0 PRJNA371613 8298 166 0.992248 1.64713168 Artemia franciscana 6661 Arthropoda Arthropoda 58.5 5.66e-9   NR XP_065564247.1 6661 g8122 i0 75.6 0.740963855421687 41 9 74.1 1 132 10 7 46 XP_065564247.1 uncharacterized protein LOC136029671 [Artemia franciscana] diamond 123 58.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;