RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA358049" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA358049 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31528708 31528708 PRJNA358049_S_NODE_15716_length_169_cov_2.216667_g15668_i0 PRJNA358049 15716 169 2.216667 3.74616723 Galendromus occidentalis 34638 Arthropoda Arthropoda 105 1.41e-24   NR XP_003747941.1 34638 g15668 i0 100 0.869822485207101 49 0 87 0 159 13 18 66 XP_003747941.1 membralin [Galendromus occidentalis] diamond 147 105 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
31908152 31908152 PRJNA358049_S_NODE_4217_length_293_cov_1.754098_g4169_i0 PRJNA358049 4217 293 1.754098 5.13950714 Chironomus riparius 315576 Arthropoda Arthropoda 90.1 6.92e-20   NR CAG9809115.1 315576 g4169 i0 59.8 1.60750853242321 87 30 84 1 16 261 125 211 CAG9809115.1 unnamed protein product [Chironomus riparius] diamond 471 90.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Chironomus Chironomus riparius

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;