RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA358049" and tax_clade = "dsRNA viruses"

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tax_superkingdom 1

tax_clade 1

  • dsRNA viruses · 2 ✖

bioproject 1

  • PRJNA358049 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27454285 27454285 PRJNA358049_S_NODE_18823_length_160_cov_2.324324_g18775_i0 PRJNA358049 18823 160 2.324324 3.7189184 Gremmeniella abietina RNA virus 6 1565456 Viruses Viruses 59.7 1.26e-8   NR AIU98624.1 1565456 g18775 i0 60.4 0.9 48 17 88.1 2 160 20 469 515 AIU98624.1 RNA-dependent RNA polymerase [Gremmeniella abietina RNA virus 6] diamond 144 59.7 1 Viruses dsRNA viruses             Gremmeniella abietina RNA virus 6
30755535 30755535 PRJNA358049_S_NODE_8474_length_217_cov_1.232143_g8426_i0 PRJNA358049 8474 217 1.232143 2.67375031 Viruses 10239 Viruses Viruses 101 4.579999999999999e-23   NR AIU98624.1 1565456 g8426 i0 65.2 2.91705069124424 69 24 95.4 0 3 209 352 420 AIU98624.1 RNA-dependent RNA polymerase [Gremmeniella abietina RNA virus 6] diamond 633 102 0.990196078431373 Viruses dsRNA viruses             Gremmeniella abietina RNA virus 6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;