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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA358009" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA358009 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1673000 1673000 PRJNA358009_P_NODE_4402_length_327_cov_2.147482_g4339_i0 PRJNA358009 4402 327 2.147482 7.02226614 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 106 3.689999999999999e-24   NR MBI2378747.1 2026735 g4339 i0 54 2.07339449541284 113 47 99.1 1 3 326 525 637 MBI2378747.1 GcvT family protein [Deltaproteobacteria bacterium] diamond 678 106 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
20799783 20799783 PRJNA358009_P_NODE_2757_length_327_cov_3.287770_g2694_i0 PRJNA358009 2757 327 3.28777 10.7510079 Myxococcia 32015 Bacteria Bacteria 92 1.59e-19   NR MBK7584397.1 2026763 g2694 i0 50.9 3.96330275229358 108 16 99.1 1 3 326 59 129 MBK7584397.1 aldo/keto reductase [Myxococcales bacterium] diamond 1296 92 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
26599733 26599733 PRJNA358009_P_NODE_14801_length_164_cov_0.886957_g14732_i0 PRJNA358009 14801 164 0.886957 1.45460948 Polyangiaceae bacterium 2268199 Bacteria Bacteria 76.3 1.69e-14   NR HVJ14070.1 2268199 g14732 i0 68.6 0.932926829268293 51 16 93.3 0 3 155 253 303 HVJ14070.1 hypothetical protein [Polyangiaceae bacterium] diamond 153 76.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27074828 27074828 PRJNA358009_P_NODE_5882_length_327_cov_1.611511_g5819_i0 PRJNA358009 5882 327 1.611511 5.26964097 Polyangiaceae bacterium 2268199 Bacteria Bacteria 64.7 1.34e-9   NR HET7541141.1 2268199 g5819 i0 36.7 1 109 28 98.2 2 322 2 80 149 HET7541141.1 LysR family transcriptional regulator [Polyangiaceae bacterium] diamond 327 64.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27675339 27675339 PRJNA358009_P_NODE_6044_length_327_cov_1.561151_g5981_i0 PRJNA358009 6044 327 1.561151 5.10496377 Polyangiaceae bacterium 2268199 Bacteria Bacteria 70.9 1.28e-11   NR MFO0667773.1 2268199 g5981 i0 38.3 2.10091743119266 115 64 99.1 1 3 326 114 228 MFO0667773.1 serine/threonine-protein kinase [Polyangiaceae bacterium] diamond 687 70.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28022556 28022556 PRJNA358009_P_NODE_3785_length_327_cov_2.438849_g3722_i0 PRJNA358009 3785 327 2.438849 7.97503623 Polyangiaceae bacterium 2268199 Bacteria Bacteria 59.3 2e-8   NR MEO6574730.1 2268199 g3722 i0 87.1 0.568807339449541 31 4 28.4 0 100 8 8 38 MEO6574730.1 VOC family protein [Polyangiaceae bacterium] diamond 186 59.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28401301 28401301 PRJNA358009_P_NODE_4386_length_327_cov_2.151079_g4323_i0 PRJNA358009 4386 327 2.151079 7.03402833 Myxococcales bacterium 2026763 Bacteria Bacteria 70.5 1.81e-11   NR MBK6463064.1 2026763 g4323 i0 48.9 0.862385321100917 94 8 86.2 1 8 289 709 762 MBK6463064.1 polyphosphate kinase 1 [Myxococcales bacterium] diamond 282 70.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28559340 28559340 PRJNA358009_P_NODE_10607_length_179_cov_1.569231_g10538_i0 PRJNA358009 10607 179 1.569231 2.80892349 Polyangiaceae bacterium 2268199 Bacteria Bacteria 53.9 1.03e-6   NR HEY2511347.1 2268199 g10538 i0 48.3 1.74301675977654 58 27 92.2 1 4 168 108 165 HEY2511347.1 DNA-3-methyladenine glycosylase [Polyangiaceae bacterium] diamond 312 53.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28607857 28607857 PRJNA358009_P_NODE_15067_length_163_cov_1.789474_g14998_i0 PRJNA358009 15067 163 1.789474 2.91684262 Bacteria 2 Bacteria Bacteria 83.6 3.95e-18   NR MBS2011573.1 2026735 g14998 i0 76.1 2.5398773006135 46 10 84.7 1 156 19 164 208 MBS2011573.1 cytochrome c3 family protein [Deltaproteobacteria bacterium] diamond 414 83.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29096044 29096044 PRJNA358009_P_NODE_8188_length_205_cov_3.884615_g8119_i0 PRJNA358009 8188 205 3.884615 7.96346075 Labilithrix sp. 1971228 Bacteria Bacteria 85.1 2.61e-17   NR HSO31238.1 1971228 g8119 i0 64.4 1.72682926829268 59 21 86.3 0 182 6 726 784 HSO31238.1 protein kinase [Labilithrix sp.] diamond 354 85.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
29176381 29176381 PRJNA358009_P_NODE_16549_length_160_cov_6.486486_g16480_i0 PRJNA358009 16549 160 6.486486 10.3783776 Bacteria 2 Bacteria Bacteria 84.3 2.54e-17   NR HEX4447968.1 2268199 g16480 i0 75.5 7.40625 49 12 91.9 0 9 155 704 752 HEX4447968.1 TIGR03960 family B12-binding radical SAM protein [Polyangiaceae bacterium] diamond 1185 84.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29460048 29460048 PRJNA358009_P_NODE_15590_length_162_cov_1.805310_g15521_i0 PRJNA358009 15590 162 1.80531 2.9246022 Bacteria 2 Bacteria Bacteria 106 5.17e-25   NR MBI5538329.1 2026735 g15521 i0 92.2 8.5 51 4 94.4 0 160 8 574 624 MBI5538329.1 beta-propeller domain-containing protein [Deltaproteobacteria bacterium] diamond 1377 106 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29569446 29569446 PRJNA358009_P_NODE_14490_length_164_cov_1.773913_g14421_i0 PRJNA358009 14490 164 1.773913 2.90921732 Sandaracinus amylolyticus 927083 Bacteria Bacteria 61.6 2.54e-9   NR WP_053231028.1 927083 g14421 i0 59.6 0.951219512195122 52 21 95.1 0 2 157 196 247 WP_053231028.1 hypothetical protein [Sandaracinus amylolyticus] diamond 156 61.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
29712573 29712573 PRJNA358009_P_NODE_13350_length_166_cov_4.136752_g13281_i0 PRJNA358009 13350 166 4.136752 6.86700832 Polyangiales 3031712 Bacteria Bacteria 90.5 3.4900000000000005e-21   NR MBX3191450.1 1971228 g13281 i0 88.5 11.2951807228916 52 6 94 0 164 9 25 76 MBX3191450.1 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Labilithrix sp.] diamond 1875 90.9 0.995599559955996 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
29948531 29948531 PRJNA358009_P_NODE_5831_length_327_cov_1.625899_g5768_i0 PRJNA358009 5831 327 1.625899 5.31668973 Myxococcota bacterium 2818507 Bacteria Bacteria 55.8 5.32e-7   NR HRE89373.1 2818507 g5768 i0 77.4 0.284403669724771 31 7 28.4 0 228 320 31 61 HRE89373.1 DUF2442 domain-containing protein [Myxococcota bacterium] diamond 93 55.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30264736 30264736 PRJNA358009_P_NODE_4012_length_327_cov_2.316547_g3949_i0 PRJNA358009 4012 327 2.316547 7.57510869 Myxococcales bacterium 2026763 Bacteria Bacteria 86.3 4.13e-17   NR MCA9583872.1 2026763 g3949 i0 40.8 1.14678899082569 125 56 98.2 1 326 6 197 321 MCA9583872.1 FHA domain-containing protein [Myxococcales bacterium] diamond 375 86.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30611840 30611840 PRJNA358009_P_NODE_14773_length_164_cov_0.886957_g14704_i0 PRJNA358009 14773 164 0.886957 1.45460948 Labilithrix sp. 1971228 Bacteria Bacteria 80.9 4.37e-16   NR HSO35561.1 1971228 g14704 i0 74.1 1.90243902439024 54 14 98.8 0 164 3 357 410 HSO35561.1 AgmX/PglI C-terminal domain-containing protein [Labilithrix sp.] diamond 312 80.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
31654935 31654935 PRJNA358009_P_NODE_9857_length_183_cov_4.664179_g9788_i0 PRJNA358009 9857 183 4.664179 8.53544757 Polyangiaceae bacterium 2268199 Bacteria Bacteria 103 2.0199999999999998e-24   NR HTA89467.1 2268199 g9788 i0 74.6 0.967213114754098 59 15 96.7 0 6 182 163 221 HTA89467.1 hypothetical protein [Polyangiaceae bacterium] diamond 177 103 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31781460 31781460 PRJNA358009_P_NODE_10257_length_181_cov_2.053030_g10188_i0 PRJNA358009 10257 181 2.05303 3.7159843 Polyangiaceae bacterium 2268199 Bacteria Bacteria 109 3.55e-26   NR MEO8874357.1 2268199 g10188 i0 86 1.88950276243094 57 8 94.5 0 179 9 428 484 MEO8874357.1 penicillin-binding transpeptidase domain-containing protein [Polyangiaceae bacterium] diamond 342 109 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32288184 32288184 PRJNA358009_P_NODE_5879_length_327_cov_1.611511_g5816_i0 PRJNA358009 5879 327 1.611511 5.26964097 Labilithrix sp. 1971228 Bacteria Bacteria 56.6 1.23e-6   NR MBX3231279.1 1971228 g5816 i0 34 0.972477064220184 106 47 97.2 1 325 8 180 262 MBX3231279.1 hypothetical protein [Labilithrix sp.] diamond 318 56.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
32761481 32761481 PRJNA358009_P_NODE_11640_length_173_cov_2.443548_g11571_i0 PRJNA358009 11640 173 2.443548 4.22733804 Labilithrix sp. 1971228 Bacteria Bacteria 62.8 1.17e-9   NR MBX3189752.1 1971228 g11571 i0 56.4 3.8150289017341 55 24 95.4 0 2 166 90 144 MBX3189752.1 ArsA family ATPase [Labilithrix sp.] diamond 660 62.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;