RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA358009" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA358009 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28843162 28843162 PRJNA358009_P_NODE_3888_length_327_cov_2.384892_g3825_i0 PRJNA358009 3888 327 2.384892 7.79859684 Grapevine wood holobiome associated narna-like virus 8 3398665 Viruses Viruses 43.9 0.0298   NR XOD45351.1 3398665 g3825 i0 60 0.275229357798165 30 12 27.5 0 229 318 196 225 XOD45351.1 HP1 [Grapevine wood holobiome associated narna-like virus 8] diamond 90 43.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 8
31497119 31497119 PRJNA358009_P_NODE_9336_length_186_cov_9.189781_g9267_i0 PRJNA358009 9336 186 9.189781 17.09299266 Grapevine wood holobiome associated narna-like virus 8 3398665 Viruses Viruses 41.6 0.0417   NR XOD45351.1 3398665 g9267 i0 42.1 0.919354838709677 57 30 87.1 1 19 180 73 129 XOD45351.1 HP1 [Grapevine wood holobiome associated narna-like virus 8] diamond 171 41.6 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 8
32066272 32066272 PRJNA358009_P_NODE_2138_length_328_cov_3.025090_g2075_i0 PRJNA358009 2138 328 3.02509 9.9222952 Hangzhou mitovirus 7 2905242 Viruses Viruses 57.4 7.26e-7   NR UHK03006.1 2905242 g2075 i0 33.9 1.02439024390244 112 43 98.8 3 2 325 64 148 UHK03006.1 MAG: RNA-dependent RNA polymerase [Hangzhou mitovirus 7] diamond 336 57.4 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Hangzhou mitovirus 7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;