RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA358009" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA358009 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20199004 20199004 PRJNA358009_P_NODE_11936_length_171_cov_6.663934_g11867_i0 PRJNA358009 11936 171 6.663934 11.39532714 Bacillati 1783272 Bacteria Bacteria 92 1.95e-21   NR MFN8550896.1 2364082 g11867 i0 75.9 7.54385964912281 54 13 94.7 0 9 170 104 157 MFN8550896.1 FAD-linked oxidase C-terminal domain-containing protein [Candidatus Obscuribacterales bacterium] diamond 1290 92.4 0.995670995670996 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
27043242 27043242 PRJNA358009_P_NODE_2122_length_328_cov_3.505376_g2059_i0 PRJNA358009 2122 328 3.505376 11.49763328 Oculatellaceae cyanobacterium 3088181 Bacteria Bacteria 47.8 0.00163   NR HEY9758426.1 3088181 g2059 i0 66.7 0.274390243902439 30 10 27.4 0 97 8 308 337 HEY9758426.1 acyltransferase [Oculatellaceae cyanobacterium] diamond 90 47.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oculatellales Oculatellaceae   Oculatellaceae cyanobacterium
29853793 29853793 PRJNA358009_P_NODE_16991_length_158_cov_4.834862_g16922_i0 PRJNA358009 16991 158 4.834862 7.63908196 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 100 3.87e-23   NR MEY3767674.1 2847862 g16922 i0 94 0.949367088607595 50 3 94.9 0 151 2 119 168 MEY3767674.1 hypothetical protein [Cyanobacteriota bacterium] diamond 150 100 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium
30801439 30801439 PRJNA358009_P_NODE_17154_length_157_cov_6.157407_g17085_i0 PRJNA358009 17154 157 6.157407 9.66712899 Dolichospermum sp. 2720786 Bacteria Bacteria 40.8 0.0222   NR MFM6703119.1 2720786 g17085 i0 41.9 0.821656050955414 43 25 82.2 0 136 8 45 87 MFM6703119.1 hypothetical protein [Dolichospermum sp.] diamond 129 40.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Aphanizomenonaceae Dolichospermum Dolichospermum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;