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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA356682" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 27 ✖

bioproject 1

  • PRJNA356682 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1672662 1672662 PRJNA356682_P_NODE_5002_length_634_cov_2.247772_g4328_i0 PRJNA356682 5002 634 2.247772 14.25087448 archaeon 1906665 Archaea Archaea 176 6.22e-53   NR RYH29492.1 1906665 g4328 i0 76.9 0.553627760252366 117 22 53 1 36 371 1 117 RYH29492.1 MAG: 50S ribosomal protein L30e [archaeon] diamond 351 176 1 Archaea               archaeon
2948400 2948400 PRJNA356682_P_NODE_38383_length_248_cov_0.880000_g37692_i0 PRJNA356682 38383 248 0.88 2.1824 Halopenitus sp. 1979403 Archaea Archaea 108 1.67e-25   NR MFB6236002.1 1979403 g37692 i0 69.1 1.13709677419355 94 17 99.2 1 248 3 1 94 MFB6236002.1 helix-turn-helix transcriptional regulator [Halopenitus sp.] diamond 282 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halopenitus Halopenitus sp.
4225006 4225006 PRJNA356682_P_NODE_39004_length_247_cov_2.022989_g38313_i0 PRJNA356682 39004 247 2.022989 4.99678283 archaeon 1906665 Archaea Archaea 103 2.17e-26   NR RYG67591.1 1906665 g38313 i0 78.8 0.801619433198381 66 14 80.2 0 198 1 2 67 RYG67591.1 MAG: 50S ribosomal protein L23 [archaeon] diamond 198 103 1 Archaea               archaeon
18249041 18249041 PRJNA356682_P_NODE_22095_length_309_cov_1.394068_g21404_i0 PRJNA356682 22095 309 1.394068 4.30767012 archaeon 1906665 Archaea Archaea 191 5.899999999999999e-58   NR RYH04926.1 1906665 g21404 i0 93.1 0.990291262135922 102 7 99 0 2 307 72 173 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 306 191 1 Archaea               archaeon
27011476 27011476 PRJNA356682_P_NODE_24402_length_296_cov_1.381166_g23711_i0 PRJNA356682 24402 296 1.381166 4.08825136 archaeon 1906665 Archaea Archaea 47 0.00233   NR RYG67462.1 1906665 g23711 i0 81.5 0.273648648648649 27 5 27.4 0 82 2 1 27 RYG67462.1 MAG: hypothetical protein EON64_07385, partial [archaeon] diamond 81 47 1 Archaea               archaeon
27169433 27169433 PRJNA356682_P_NODE_39662_length_247_cov_0.885057_g38971_i0 PRJNA356682 39662 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 152 4.38e-41   NR RYG66447.1 1906665 g38971 i0 87.7 0.983805668016194 81 10 98.4 0 245 3 347 427 RYG66447.1 MAG: hypothetical protein EON64_09740 [archaeon] diamond 243 152 1 Archaea               archaeon
27296109 27296109 PRJNA356682_P_NODE_47663_length_199_cov_17.000000_g46972_i0 PRJNA356682 47663 199 17 33.83 Nanobdellota archaeon 2026764 Archaea Archaea 108 3.3600000000000003e-29   NR MCA9460427.1 2026764 g46972 i0 89.2 0.979899497487437 65 7 98 0 197 3 10 74 MCA9460427.1 hypothetical protein [Nanoarchaeota archaeon] diamond 195 108 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27580303 27580303 PRJNA356682_P_NODE_13204_length_388_cov_0.974603_g12514_i0 PRJNA356682 13204 388 0.974603 3.78145964 archaeon 1906665 Archaea Archaea 167 1.86e-49   NR RYG65124.1 1906665 g12514 i0 87.4 0.734536082474227 95 12 73.5 0 386 102 118 212 RYG65124.1 MAG: 30S ribosomal protein S5 [archaeon] diamond 285 167 1 Archaea               archaeon
27580307 27580307 PRJNA356682_P_NODE_19884_length_323_cov_2.376000_g19193_i0 PRJNA356682 19884 323 2.376 7.67448 archaeon 1906665 Archaea Archaea 177 1.1599999999999999e-54   NR RYG68742.1 1906665 g19193 i0 82.2 1.98761609907121 107 19 99.4 0 321 1 33 139 RYG68742.1 MAG: hypothetical protein EON64_04505 [archaeon] diamond 642 177 1 Archaea               archaeon
27864397 27864397 PRJNA356682_P_NODE_26225_length_287_cov_1.962617_g25534_i0 PRJNA356682 26225 287 1.962617 5.63271079 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 58.2 2.3e-7   NR MFL2966465.1 2670411 g25534 i0 67.5 0.418118466898955 40 13 41.8 0 121 2 1 40 MFL2966465.1 HAD-IA family hydrolase [Candidatus Thalassarchaeaceae archaeon] diamond 120 58.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
29222388 29222388 PRJNA356682_P_NODE_43949_length_242_cov_0.911243_g43258_i0 PRJNA356682 43949 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 150 3.6e-40   NR RYH31746.1 1906665 g43258 i0 87.5 1.98347107438017 80 10 99.2 0 1 240 722 801 RYH31746.1 MAG: phospholipid-transporting ATPase [archaeon] diamond 480 150 1 Archaea               archaeon
29411563 29411563 PRJNA356682_P_NODE_40149_length_246_cov_0.890173_g39458_i0 PRJNA356682 40149 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 114 1.11e-29   NR RYG70158.1 1906665 g39458 i0 63.8 1.92682926829268 80 29 97.6 0 244 5 51 130 RYG70158.1 MAG: hypothetical protein EON64_00885 [archaeon] diamond 474 114 1 Archaea               archaeon
29411565 29411565 PRJNA356682_P_NODE_41289_length_245_cov_0.895349_g40598_i0 PRJNA356682 41289 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 58.5 9e-8   NR RYG95241.1 1906665 g40598 i0 48.5 0.808163265306122 66 32 80.8 1 46 243 7 70 RYG95241.1 MAG: hypothetical protein EON65_56280, partial [archaeon] diamond 198 58.5 1 Archaea               archaeon
29727115 29727115 PRJNA356682_P_NODE_42110_length_244_cov_0.900585_g41419_i0 PRJNA356682 42110 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 77.8 1.63e-14   NR RYG70205.1 1906665 g41419 i0 50 1.00819672131148 82 38 97.1 1 239 3 31 112 RYG70205.1 MAG: nitrile hydratase subunit beta [archaeon] diamond 246 77.8 1 Archaea               archaeon
29744269 29744269 PRJNA356682_P_NODE_43870_length_242_cov_0.911243_g43179_i0 PRJNA356682 43870 242 0.911243 2.20520806 Methanobrevibacter 2172 Archaea Archaea 156 2.7799999999999992e-43   NR MEE1149620.1 66852 g43179 i0 97.5 3.96694214876033 80 2 99.2 0 3 242 118 197 MEE1149620.1 AAA family ATPase [Methanobrevibacter sp.] diamond 960 156 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30391276 30391276 PRJNA356682_P_NODE_5653_length_593_cov_2.065385_g4975_i0 PRJNA356682 5653 593 2.065385 12.24773305 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 56.6 5.83e-6   NR TFH07295.1 2053491 g4975 i0 50.8 0.328836424957841 65 30 32.4 2 592 401 98 161 TFH07295.1 MAG: hypothetical protein E4H14_08830 [Candidatus Thorarchaeota archaeon] diamond 195 56.6 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30422776 30422776 PRJNA356682_P_NODE_19773_length_324_cov_2.195219_g19082_i0 PRJNA356682 19773 324 2.195219 7.11250956 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 65.1 1.29e-9   NR MCS6785098.1 2972665 g19082 i0 42.6 0.87037037037037 94 50 86.1 2 316 38 121 211 MCS6785098.1 hypothetical protein [Candidatus Caldarchaeum sp.] diamond 282 65.1 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
30454240 30454240 PRJNA356682_P_NODE_40253_length_246_cov_0.890173_g39562_i0 PRJNA356682 40253 246 0.890173 2.18982558 Methanosarcina sp. 2213 Archaea Archaea 114 9.979999999999999e-30   NR HET8688789.1 2213 g39562 i0 65.8 0.890243902439024 73 24 87.8 1 21 236 8 80 HET8688789.1 hypothetical protein [Methanosarcina sp.] diamond 219 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30770065 30770065 PRJNA356682_P_NODE_32654_length_261_cov_2.031915_g31963_i0 PRJNA356682 32654 261 2.031915 5.30329815 archaeon 1906665 Archaea Archaea 117 1.43e-31   NR RYG63904.1 1906665 g31963 i0 83.3 0.827586206896552 72 12 82.8 0 3 218 55 126 RYG63904.1 MAG: hypothetical protein EON64_15030 [archaeon] diamond 216 117 1 Archaea               archaeon
30864647 30864647 PRJNA356682_P_NODE_38774_length_248_cov_0.880000_g38083_i0 PRJNA356682 38774 248 0.88 2.1824 archaeon 1906665 Archaea Archaea 135 1.9399999999999997e-37   NR RYH15649.1 1906665 g38083 i0 84.1 0.991935483870968 82 13 99.2 0 1 246 96 177 RYH15649.1 MAG: hypothetical protein EON65_31430 [archaeon] diamond 246 135 1 Archaea               archaeon
31402253 31402253 PRJNA356682_P_NODE_44996_length_241_cov_0.916667_g44305_i0 PRJNA356682 44996 241 0.916667 2.20916747 uncultured Nitrososphaera sp. 759874 Archaea Archaea 53.1 1.09e-6   NR WP_294807835.1 759874 g44305 i0 100 0.572614107883817 46 0 57.3 0 140 3 68 113 WP_294807835.1 hypothetical protein [uncultured Nitrososphaera sp.] diamond 138 53.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera uncultured Nitrososphaera sp.
31592024 31592024 PRJNA356682_P_NODE_46236_length_231_cov_2.088608_g45545_i0 PRJNA356682 46236 231 2.088608 4.82468448 archaeon 1906665 Archaea Archaea 80.9 7.85e-18   NR RYH04918.1 1906665 g45545 i0 66.2 0.883116883116883 68 21 88.3 1 229 26 32 97 RYH04918.1 MAG: 50S ribosomal protein L24 [archaeon] diamond 204 80.9 1 Archaea               archaeon
31939665 31939665 PRJNA356682_P_NODE_19017_length_330_cov_0.972763_g18326_i0 PRJNA356682 19017 330 0.972763 3.2101179 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 44.3 0.0206   NR MCW3996493.1 2026714 g18326 i0 60 0.363636363636364 40 12 36.4 2 186 67 165 200 MCW3996493.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 120 44.3 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32051849 32051849 PRJNA356682_P_NODE_43738_length_242_cov_0.911243_g43047_i0 PRJNA356682 43738 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 106 8.43e-25   NR MBX7076496.1 2099680 g43047 i0 82.3 1.53719008264463 62 11 76.9 0 1 186 452 513 MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] diamond 372 106 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
32319841 32319841 PRJNA356682_P_NODE_36919_length_250_cov_0.870056_g36228_i0 PRJNA356682 36919 250 0.870056 2.17514 Methanobrevibacter sp. 66852 Archaea Archaea 150 7.429999999999998e-42   NR MCR5026642.1 66852 g36228 i0 91.6 0.996 83 7 99.6 0 249 1 44 126 MCR5026642.1 MFS transporter [Methanobrevibacter sp.] diamond 249 150 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32319846 32319846 PRJNA356682_P_NODE_43079_length_243_cov_0.905882_g42388_i0 PRJNA356682 43079 243 0.905882 2.20129326 Nitrososphaera sp. 1971748 Archaea Archaea 113 8.82e-30   NR HEX2014916.1 1971748 g42388 i0 64.6 0.975308641975309 79 28 97.5 0 2 238 62 140 HEX2014916.1 PepSY domain-containing protein [Nitrososphaera sp.] diamond 237 113 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32382765 32382765 PRJNA356682_P_NODE_32339_length_262_cov_2.370370_g31648_i0 PRJNA356682 32339 262 2.37037 6.2103694 Thermoplasmatota archaeon 2806419 Archaea Archaea 46.2 0.00107   NR MCL5681076.1 2806419 g31648 i0 38.9 0.824427480916031 72 39 76.7 2 240 40 46 117 MCL5681076.1 OB-fold nucleic acid binding domain-containing protein [Thermoplasmatota archaeon] diamond 216 46.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;