RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA356682" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA356682 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28323557 28323557 PRJNA356682_P_NODE_39666_length_247_cov_0.885057_g38975_i0 PRJNA356682 39666 247 0.885057 2.18609079 Eukaryota 2759 Fungi Fungi 70.5 6.94e-12   NR CAG8434307.1 984092 g38975 i0 52.5 4.66396761133603 61 28 74.1 1 184 2 1942 2001 CAG8434307.1 6983_t:CDS:10 [Entrophospora candida] diamond 1152 70.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae Entrophospora Entrophospora candida
28639629 28639629 PRJNA356682_P_NODE_41047_length_245_cov_0.895349_g40356_i0 PRJNA356682 41047 245 0.895349 2.19360505 Glomeraceae 36751 Fungi Fungi 48.1 3.5e-4   NR XP_025175522.1 588596 g40356 i0 43.8 1.97142857142857 80 44 98 1 245 6 67 145 XP_025175522.1 uncharacterized protein OCT59_029702 [Rhizophagus irregularis] diamond 483 48.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
30296477 30296477 PRJNA356682_P_NODE_42972_length_243_cov_0.905882_g42281_i0 PRJNA356682 42972 243 0.905882 2.20129326 Actinomortierella wolfii 90253 Fungi Fungi 68.6 3.05e-11   NR KAG0228924.1 90253 g42281 i0 53.8 1.97530864197531 80 31 98.8 2 242 3 33 106 KAG0228924.1 hypothetical protein BGW42_001877 [Actinomortierella wolfii] diamond 480 68.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Actinomortierella Actinomortierella wolfii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;