contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA356682" and tax_phylum = "Lenarviricota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26726267 | 26726267 | PRJNA356682_P_NODE_40701_length_245_cov_2.255814_g40010_i0 | PRJNA356682 | 40701 | 245 | 2.255814 | 5.5267443 | Sonabek virus | 3131524 | Viruses | Viruses | 48.9 | 1.2e-4 | NR | WZH61556.1 | 3131524 | g40010 | i0 | 74.4 | 0.477551020408163 | 39 | 10 | 47.8 | 0 | 131 | 15 | 41 | 79 | WZH61556.1 MAG: hypothetical protein [Sonabek virus] | diamond | 117 | 48.9 | 1 | Viruses | Orthornavirae | Lenarviricota | Howeltoviricetes | Cryppavirales | Mitoviridae | Sonabek virus | |||
| 27454265 | 27454265 | PRJNA356682_P_NODE_18203_length_336_cov_1.543726_g17512_i0 | PRJNA356682 | 18203 | 336 | 1.543726 | 5.18691936 | ssRNA phage SRR5467 | 2845702 | Viruses | Viruses | 50.4 | 1.98e-4 | NR | YP_010770102.1 | 2786474 | g17512 | i0 | 35.2 | 0.633928571428571 | 71 | 46 | 63.4 | 0 | 2 | 214 | 321 | 391 | YP_010770102.1 maturation protein [ssRNA phage SRR5467091_9] | diamond | 213 | 50.4 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Norzivirales | Solspiviridae | Oekfovirus | Oekfovirus sp. 'lutivicinum' | ||
| 28180058 | 28180058 | PRJNA356682_P_NODE_43806_length_242_cov_0.911243_g43115_i0 | PRJNA356682 | 43806 | 242 | 0.911243 | 2.20520806 | ssRNA phage ESE | 3430437 | Viruses | Viruses | 138 | 3.3e-36 | NR | YP_010769154.1 | 2786005 | g43115 | i0 | 78.8 | 0.991735537190083 | 80 | 17 | 99.2 | 0 | 242 | 3 | 442 | 521 | YP_010769154.1 RNA-directed RNA polymerase [ssRNA phage ESE029] | diamond | 240 | 138 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Norzivirales | Fiersviridae | Lohngkovirus | Lohngkovirus defluviicola | ||
| 31686630 | 31686630 | PRJNA356682_P_NODE_8877_length_469_cov_3.174242_g8188_i0 | PRJNA356682 | 8877 | 469 | 3.174242 | 14.88719498 | Qianjiang levi-like virus 15 | 3348422 | Viruses | Viruses | 49.7 | 0.00126 | NR | XHA87311.1 | 3348422 | g8188 | i0 | 40 | 0.479744136460554 | 75 | 39 | 44.8 | 2 | 108 | 317 | 1 | 74 | XHA87311.1 MAG: putative phage maturation protein [Qianjiang levi-like virus 15] | diamond | 225 | 49.7 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Qianjiang levi-like virus 15 | |||||
| 31876367 | 31876367 | PRJNA356682_P_NODE_10537_length_431_cov_1.656425_g9847_i0 | PRJNA356682 | 10537 | 431 | 1.656425 | 7.13919175 | ssRNA phage SRR5467 | 2845702 | Viruses | Viruses | 102 | 2.25e-22 | NR | YP_010770102.1 | 2786474 | g9847 | i0 | 39.3 | 0.939675174013921 | 135 | 81 | 94 | 1 | 2 | 406 | 189 | 322 | YP_010770102.1 maturation protein [ssRNA phage SRR5467091_9] | diamond | 405 | 102 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Norzivirales | Solspiviridae | Oekfovirus | Oekfovirus sp. 'lutivicinum' | ||
| 32792714 | 32792714 | PRJNA356682_P_NODE_10000_length_442_cov_3.907859_g9310_i0 | PRJNA356682 | 10000 | 442 | 3.907859 | 17.27273678 | Leviviridae sp. | 2027243 | Viruses | Viruses | 103 | 1.08e-22 | NR | URG15324.1 | 2027243 | g9310 | i0 | 46.5 | 0.773755656108597 | 114 | 61 | 77.4 | 0 | 87 | 428 | 88 | 201 | URG15324.1 MAG: RNA dependent RNA polymerase, partial [Leviviridae sp.] | diamond | 342 | 103 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Norzivirales | Fiersviridae | Leviviridae sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;