RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA356682" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA356682 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27011490 27011490 PRJNA356682_P_NODE_39342_length_247_cov_0.885057_g38651_i0 PRJNA356682 39342 247 0.885057 2.18609079 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 80.5 1.97e-15   NR PRP77992.1 1890364 g38651 i0 46.3 1.94331983805668 80 43 97.2 0 245 6 791 870 PRP77992.1 hypothetical protein PROFUN_14080 [Planoprotostelium fungivorum] diamond 480 80.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29032993 29032993 PRJNA356682_P_NODE_44728_length_241_cov_0.916667_g44037_i0 PRJNA356682 44728 241 0.916667 2.20916747 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 106 4.04e-25   NR XP_012760046.1 1410327 g44037 i0 62 2.95020746887967 79 30 98.3 0 3 239 167 245 XP_012760046.1 hypothetical protein SAMD00019534_037000 [Acytostelium subglobosum LB1] diamond 711 106 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;