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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA356682" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJNA356682 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2948400 2948400 PRJNA356682_P_NODE_38383_length_248_cov_0.880000_g37692_i0 PRJNA356682 38383 248 0.88 2.1824 Halopenitus sp. 1979403 Archaea Archaea 108 1.67e-25   NR MFB6236002.1 1979403 g37692 i0 69.1 1.13709677419355 94 17 99.2 1 248 3 1 94 MFB6236002.1 helix-turn-helix transcriptional regulator [Halopenitus sp.] diamond 282 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halopenitus Halopenitus sp.
27864397 27864397 PRJNA356682_P_NODE_26225_length_287_cov_1.962617_g25534_i0 PRJNA356682 26225 287 1.962617 5.63271079 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 58.2 2.3e-7   NR MFL2966465.1 2670411 g25534 i0 67.5 0.418118466898955 40 13 41.8 0 121 2 1 40 MFL2966465.1 HAD-IA family hydrolase [Candidatus Thalassarchaeaceae archaeon] diamond 120 58.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
29744269 29744269 PRJNA356682_P_NODE_43870_length_242_cov_0.911243_g43179_i0 PRJNA356682 43870 242 0.911243 2.20520806 Methanobrevibacter 2172 Archaea Archaea 156 2.7799999999999992e-43   NR MEE1149620.1 66852 g43179 i0 97.5 3.96694214876033 80 2 99.2 0 3 242 118 197 MEE1149620.1 AAA family ATPase [Methanobrevibacter sp.] diamond 960 156 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30454240 30454240 PRJNA356682_P_NODE_40253_length_246_cov_0.890173_g39562_i0 PRJNA356682 40253 246 0.890173 2.18982558 Methanosarcina sp. 2213 Archaea Archaea 114 9.979999999999999e-30   NR HET8688789.1 2213 g39562 i0 65.8 0.890243902439024 73 24 87.8 1 21 236 8 80 HET8688789.1 hypothetical protein [Methanosarcina sp.] diamond 219 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
32051849 32051849 PRJNA356682_P_NODE_43738_length_242_cov_0.911243_g43047_i0 PRJNA356682 43738 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 106 8.43e-25   NR MBX7076496.1 2099680 g43047 i0 82.3 1.53719008264463 62 11 76.9 0 1 186 452 513 MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] diamond 372 106 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
32319841 32319841 PRJNA356682_P_NODE_36919_length_250_cov_0.870056_g36228_i0 PRJNA356682 36919 250 0.870056 2.17514 Methanobrevibacter sp. 66852 Archaea Archaea 150 7.429999999999998e-42   NR MCR5026642.1 66852 g36228 i0 91.6 0.996 83 7 99.6 0 249 1 44 126 MCR5026642.1 MFS transporter [Methanobrevibacter sp.] diamond 249 150 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32382765 32382765 PRJNA356682_P_NODE_32339_length_262_cov_2.370370_g31648_i0 PRJNA356682 32339 262 2.37037 6.2103694 Thermoplasmatota archaeon 2806419 Archaea Archaea 46.2 0.00107   NR MCL5681076.1 2806419 g31648 i0 38.9 0.824427480916031 72 39 76.7 2 240 40 46 117 MCL5681076.1 OB-fold nucleic acid binding domain-containing protein [Thermoplasmatota archaeon] diamond 216 46.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;