RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA352850" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJNA352850 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27439929 27439929 PRJNA352850_P_NODE_66783_length_277_cov_3.307018_g63950_i0 PRJNA352850 66783 277 3.307018 9.16043986 Nanobdellati 1783276 Archaea Archaea 45.1 0.0088   NR MFC1685448.1 2026764 g63950 i0 27.9 4.70036101083033 86 61 93.1 1 276 19 742 826 MFC1685448.1 aminopeptidase N [Nanoarchaeota archaeon] diamond 1302 45.4 0.993392070484582 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27801490 27801490 PRJNA352850_P_NODE_70464_length_267_cov_4.454128_g67631_i0 PRJNA352850 70464 267 4.454128 11.89252176 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 97.4 1.2699999999999999e-23   NR MBS3135864.1 2026803 g67631 i0 54.1 0.955056179775281 85 39 95.5 0 259 5 55 139 MBS3135864.1 YbhB/YbcL family Raf kinase inhibitor-like protein [Candidatus Woesearchaeota archaeon] diamond 255 97.4 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
29821842 29821842 PRJNA352850_P_NODE_69471_length_270_cov_0.941176_g66638_i0 PRJNA352850 69471 270 0.941176 2.5411752 Nanobdellota archaeon 2026764 Archaea Archaea 125 4.7999999999999997e-32   NR MCA9478531.1 2026764 g66638 i0 68.6 2.92222222222222 86 27 95.6 0 258 1 227 312 MCA9478531.1 NADP-dependent malic enzyme [Nanoarchaeota archaeon] diamond 789 125 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;