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contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA352850" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 36 ✖

bioproject 1

  • PRJNA352850 · 36 ✖

analysis 1

  • diamond · 36 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
395205 395205 PRJNA352850_P_NODE_25961_length_540_cov_2.238289_g23139_i0 PRJNA352850 25961 540 2.238289 12.0867606 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 163 2.16e-48   NR MDP5039214.1 2044595 g23139 i0 90.1 0.505555555555556 91 9 50.6 0 335 63 11 101 MDP5039214.1 30S ribosomal protein S9 [Candidatus Altimarinota bacterium] diamond 273 163 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
1670044 1670044 PRJNA352850_P_NODE_32662_length_460_cov_3.895377_g29832_i0 PRJNA352850 32662 460 3.895377 17.9187342 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 135 7.13e-38   NR MDP5038914.1 2044595 g29832 i0 93.2 0.476086956521739 73 5 47.6 0 1 219 15 87 MDP5038914.1 30S ribosomal protein S8 [Candidatus Altimarinota bacterium] diamond 219 135 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
1671305 1671305 PRJNA352850_P_NODE_72902_length_263_cov_0.953271_g70069_i0 PRJNA352850 72902 263 0.953271 2.50710273 Bacteria 2 Bacteria Bacteria 91.3 4.05e-19   NR QFR38949.1 1862133 g70069 i0 79.7 6.05703422053232 59 12 67.3 0 86 262 21 79 QFR38949.1 RecQ family ATP-dependent DNA helicase [Candidatus Gracilibacteria bacterium 28_42_T64] diamond 1593 91.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
9323913 9323913 PRJNA352850_P_NODE_48348_length_350_cov_1.016611_g45515_i0 PRJNA352850 48348 350 1.016611 3.5581385 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 75.1 5.83e-13   NR MDP5039224.1 2044595 g45515 i0 81.8 0.377142857142857 44 8 37.7 0 202 71 592 635 MDP5039224.1 translation initiation factor IF-2 [Candidatus Altimarinota bacterium] diamond 132 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
18247094 18247094 PRJNA352850_P_NODE_36235_length_428_cov_1.686016_g33404_i0 PRJNA352850 36235 428 1.686016 7.21614848 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 124 1.4499999999999998e-31   NR MDP5038839.1 2044595 g33404 i0 82.2 0.511682242990654 73 13 51.2 0 337 119 246 318 MDP5038839.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Candidatus Altimarinota bacterium] diamond 219 124 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26948149 26948149 PRJNA352850_P_NODE_62402_length_291_cov_2.458678_g59569_i0 PRJNA352850 62402 291 2.458678 7.15475298 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 117 7.539999999999999e-31   NR MDP5038976.1 2044595 g59569 i0 63.5 0.989690721649485 96 35 99 0 2 289 82 177 MDP5038976.1 HD domain-containing protein [Candidatus Altimarinota bacterium] diamond 288 117 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26979841 26979841 PRJNA352850_P_NODE_49802_length_342_cov_2.037543_g46969_i0 PRJNA352850 49802 342 2.037543 6.96839706 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 65.9 5.99e-10   NR MDD2907027.1 2044595 g46969 i0 58.8 0.447368421052632 51 21 44.7 0 105 257 118 168 MDD2907027.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 153 65.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27169416 27169416 PRJNA352850_P_NODE_82702_length_245_cov_1.040816_g79869_i0 PRJNA352850 82702 245 1.040816 2.5499992 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 76.6 3.29e-14   NR MDP5038888.1 2044595 g79869 i0 83.3 0.587755102040816 48 8 58.8 0 102 245 316 363 MDP5038888.1 AAA family ATPase [Candidatus Altimarinota bacterium] diamond 144 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27327780 27327780 PRJNA352850_P_NODE_30203_length_487_cov_1.383562_g27374_i0 PRJNA352850 30203 487 1.383562 6.73794694 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 52.8 2.57e-5   NR MDD5770206.1 2044595 g27374 i0 51.6 0.394250513347023 64 31 39.4 0 274 83 78 141 MDD5770206.1 MarR family transcriptional regulator [Candidatus Altimarinota bacterium] diamond 192 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27548720 27548720 PRJNA352850_P_NODE_72904_length_263_cov_0.953271_g70071_i0 PRJNA352850 72904 263 0.953271 2.50710273 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 137 1.4499999999999998e-35   NR MBW7954265.1 2044595 g70071 i0 74.4 1.87072243346008 82 21 93.5 0 1 246 162 243 MBW7954265.1 DEAD/DEAH box helicase [Candidatus Altimarinota bacterium] diamond 492 137 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28053830 28053830 PRJNA352850_P_NODE_19465_length_663_cov_2.271987_g16713_i0 PRJNA352850 19465 663 2.271987 15.06327381 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 139 3.2e-38   NR MDD5769624.1 2044595 g16713 i0 83.3 0.352941176470588 78 13 35.3 0 257 490 14 91 MDD5769624.1 50S ribosomal protein L17 [Candidatus Altimarinota bacterium] diamond 234 139 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28116989 28116989 PRJNA352850_P_NODE_77045_length_255_cov_0.990291_g74212_i0 PRJNA352850 77045 255 0.990291 2.52524205 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 54.7 9.9e-8   NR MDR1987402.1 2053688 g74212 i0 64.4 0.529411764705882 45 16 52.9 0 118 252 18 62 MDR1987402.1 hypothetical protein [Candidatus Peribacteria bacterium] diamond 135 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
28180022 28180022 PRJNA352850_P_NODE_42686_length_382_cov_0.918919_g39853_i0 PRJNA352850 42686 382 0.918919 3.51027058 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 81.6 4.42e-15   NR MBW7954443.1 2044595 g39853 i0 65.5 1.34293193717277 58 20 45.5 0 329 156 1114 1171 MBW7954443.1 PKD domain-containing protein [Candidatus Altimarinota bacterium] diamond 513 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28306552 28306552 PRJNA352850_P_NODE_32766_length_459_cov_3.648780_g29936_i0 PRJNA352850 32766 459 3.64878 16.7479002 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 132 3.58e-36   NR MDP5038849.1 2044595 g29936 i0 84.9 0.477124183006536 73 11 47.7 0 227 9 52 124 MDP5038849.1 translation initiation factor IF-3 [Candidatus Altimarinota bacterium] diamond 219 132 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28685615 28685615 PRJNA352850_P_NODE_73387_length_262_cov_0.957746_g70554_i0 PRJNA352850 73387 262 0.957746 2.50929452 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 83.6 1.46e-16   NR MDD5770289.1 2044595 g70554 i0 54.5 0.881679389312977 77 35 88.2 0 233 3 232 308 MDD5770289.1 S-layer homology domain-containing protein [Candidatus Altimarinota bacterium] diamond 231 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29411540 29411540 PRJNA352850_P_NODE_28829_length_502_cov_2.615894_g26003_i0 PRJNA352850 28829 502 2.615894 13.13178788 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 82 4.68e-16   NR MDD5769602.1 2044595 g26003 i0 91.1 0.806772908366534 45 4 26.9 0 3 137 48 92 MDD5769602.1 50S ribosomal protein L5 [Candidatus Altimarinota bacterium] diamond 405 82 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29411544 29411544 PRJNA352850_P_NODE_61489_length_294_cov_3.857143_g58656_i0 PRJNA352850 61489 294 3.857143 11.34000042 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 71.6 4.64e-12   NR MBW7954265.1 2044595 g58656 i0 75 0.448979591836735 44 11 44.9 0 27 158 500 543 MBW7954265.1 DEAD/DEAH box helicase [Candidatus Altimarinota bacterium] diamond 132 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29491889 29491889 PRJNA352850_P_NODE_18910_length_677_cov_2.463376_g16177_i0 PRJNA352850 18910 677 2.463376 16.67705552 Bacteria 2 Bacteria Bacteria 74.7 4.65e-13   NR OGM12799.1 1802483 g16177 i0 52.5 1.88330871491876 59 25 26.1 1 126 302 79 134 OGM12799.1 MAG: hypothetical protein A2141_05545 [Candidatus Woesebacteria bacterium RBG_16_40_11] diamond 1275 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RBG_16_40_11
29569421 29569421 PRJNA352850_P_NODE_75490_length_258_cov_0.976077_g72657_i0 PRJNA352850 75490 258 0.976077 2.51827866 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 71.6 3.01e-12   NR MDD3302786.1 2044595 g72657 i0 54.7 1.48837209302326 64 29 74.4 0 193 2 102 165 MDD3302786.1 efflux RND transporter permease subunit [Candidatus Altimarinota bacterium] diamond 384 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30137632 30137632 PRJNA352850_P_NODE_24312_length_565_cov_4.468992_g21498_i0 PRJNA352850 24312 565 4.468992 25.2498048 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 83.2 4.24e-15   NR MDR3550479.1 2803731 g21498 i0 37 0.732743362831858 138 79 71.2 4 534 133 213 346 MDR3550479.1 FAD-dependent oxidoreductase [Candidatus Babeliales bacterium] diamond 414 83.2 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
30313664 30313664 PRJNA352850_P_NODE_46452_length_359_cov_4.212903_g43619_i0 PRJNA352850 46452 359 4.212903 15.12432177 Bacillati 1783272 Bacteria Bacteria 124 3.69e-30   NR WP_259099607.1 1448929 g43619 i0 55.8 5.47353760445682 104 45 86.9 1 2 313 515 617 WP_259099607.1 transketolase [Candidatus Fervidibacter sacchari] diamond 1965 124 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sacchari
30454222 30454222 PRJNA352850_P_NODE_76733_length_255_cov_2.398058_g73900_i0 PRJNA352850 76733 255 2.398058 6.1150479 Candidatus Pacebacteria bacterium CG1 1974769 Bacteria Bacteria 80.1 1.04e-15   NR PIR61648.1 1974769 g73900 i0 50 1.62352941176471 70 35 82.4 0 231 22 4 73 PIR61648.1 MAG: hypothetical protein COU66_02695 [Candidatus Pacebacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_11] diamond 414 80.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Candidatus Pacebacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_11
30643382 30643382 PRJNA352850_P_NODE_71453_length_265_cov_3.129630_g68620_i0 PRJNA352850 71453 265 3.12963 8.2935195 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 160 2.31e-47   NR MBR4329455.1 2053586 g68620 i0 88.4 0.973584905660377 86 10 97.4 0 3 260 124 209 MBR4329455.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 258 160 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
31117197 31117197 PRJNA352850_P_NODE_33455_length_453_cov_1.232673_g30625_i0 PRJNA352850 33455 453 1.232673 5.58400869 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 276 4.24e-93   NR HRO65834.1 2099670 g30625 i0 99.3 0.927152317880795 140 1 92.7 0 421 2 1 140 HRO65834.1 uL15 family ribosomal protein [Candidatus Dojkabacteria bacterium] diamond 420 276 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
31275473 31275473 PRJNA352850_P_NODE_84815_length_240_cov_3.225131_g81982_i0 PRJNA352850 84815 240 3.225131 7.7403144 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 51.6 4.95e-6   NR MDD5769600.1 2044595 g81982 i0 56.1 1.425 57 25 71.3 0 171 1 1 57 MDD5769600.1 50S ribosomal protein L14 [Candidatus Altimarinota bacterium] diamond 342 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31433593 31433593 PRJNA352850_P_NODE_81056_length_248_cov_1.025126_g78223_i0 PRJNA352850 81056 248 1.025126 2.54231248 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 102 9.27e-25   NR MDP5039108.1 2044595 g78223 i0 83.6 0.810483870967742 67 11 81 0 247 47 2 68 MDP5039108.1 PCRF domain-containing protein [Candidatus Altimarinota bacterium] diamond 201 102 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31560397 31560397 PRJNA352850_P_NODE_58976_length_304_cov_1.200000_g56143_i0 PRJNA352850 58976 304 1.2 3.648 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 133 1.41e-34   NR MDP5039094.1 2044595 g56143 i0 97.1 2.04276315789474 69 2 68.1 0 292 86 229 297 MDP5039094.1 type IV secretion system DNA-binding domain-containing protein [Candidatus Altimarinota bacterium] diamond 621 133 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31876361 31876361 PRJNA352850_P_NODE_80417_length_249_cov_1.020000_g77584_i0 PRJNA352850 80417 249 1.02 2.5398 Candidatus Absconditabacteria bacterium 3018262 Bacteria Bacteria 49.7 1.45e-4   NR MEF2174861.1 3018262 g77584 i0 42.9 0.843373493975904 70 38 83.1 2 236 30 949 1017 MEF2174861.1 hypothetical protein [Candidatus Absconditabacteria bacterium] diamond 210 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         Candidatus Absconditabacteria bacterium
31908119 31908119 PRJNA352850_P_NODE_77597_length_254_cov_0.995122_g74764_i0 PRJNA352850 77597 254 0.995122 2.52760988 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 85.9 1.01e-17   NR MDD5769806.1 2044595 g74764 i0 49.4 0.956692913385827 81 41 95.7 0 254 12 111 191 MDD5769806.1 FtsQ-type POTRA domain-containing protein [Candidatus Altimarinota bacterium] diamond 243 85.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32034717 32034717 PRJNA352850_P_NODE_31198_length_476_cov_0.936768_g28368_i0 PRJNA352850 31198 476 0.936768 4.45901568 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 109 2.5e-24   NR MDD4151536.1 2044595 g28368 i0 82.1 1.6827731092437 67 12 42.2 0 271 71 579 645 MDD4151536.1 ribonuclease J [Candidatus Altimarinota bacterium] diamond 801 109 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32066237 32066237 PRJNA352850_P_NODE_24398_length_564_cov_2.157282_g21584_i0 PRJNA352850 24398 564 2.157282 12.16707048 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 48.9 4.44e-4   NR MDD5769580.1 2044595 g21584 i0 43.9 0.436170212765957 82 46 43.6 0 317 562 2 83 MDD5769580.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 246 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32319822 32319822 PRJNA352850_P_NODE_60239_length_299_cov_1.632000_g57406_i0 PRJNA352850 60239 299 1.632 4.87968 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 125 9.039999999999999e-35   NR NDK07950.1 2044595 g57406 i0 84 3.01003344481605 75 12 75.3 0 14 238 1 75 NDK07950.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 900 125 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32477865 32477865 PRJNA352850_P_NODE_62559_length_291_cov_1.504132_g59726_i0 PRJNA352850 62559 291 1.504132 4.37702412 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 96.7 7.930000000000001e-21   NR MBW7954770.1 2044595 g59726 i0 72.3 2.68041237113402 65 18 67 0 64 258 715 779 MBW7954770.1 DNA-directed RNA polymerase subunit beta' [Candidatus Altimarinota bacterium] diamond 780 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32541191 32541191 PRJNA352850_P_NODE_10999_length_1009_cov_1.785417_g8633_i0 PRJNA352850 10999 1009 1.785417 18.01485753 Patescibacteria group bacterium 2052139 Bacteria Bacteria 130 7.470000000000001e-33   NR MEA3386884.1 2052139 g8633 i0 59.4 0.460852329038652 155 63 46.1 0 135 599 20 174 MEA3386884.1 hypothetical protein [Patescibacteria group bacterium] diamond 465 130 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32761457 32761457 PRJNA352850_P_NODE_66940_length_277_cov_1.710526_g64107_i0 PRJNA352850 66940 277 1.710526 4.73815702 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 80.5 1.78e-16   NR MDP5038944.1 2044595 g64107 i0 55.4 1.63537906137184 74 31 79.1 2 257 39 69 141 MDP5038944.1 zinc ribbon domain-containing protein [Candidatus Altimarinota bacterium] diamond 453 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32824485 32824485 PRJNA352850_P_NODE_80460_length_249_cov_1.020000_g77627_i0 PRJNA352850 80460 249 1.02 2.5398 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 129 5.13e-37   NR MDD5769984.1 2044595 g77627 i0 77.2 0.951807228915663 79 18 95.2 0 238 2 1 79 MDD5769984.1 RNA-binding protein [Candidatus Altimarinota bacterium] diamond 237 129 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;