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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA352850" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA352850 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22072868 22072868 PRJNA352850_P_NODE_64298_length_285_cov_2.338983_g61465_i0 PRJNA352850 64298 285 2.338983 6.66610155 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 85.5 1.97e-17   NR KAH3722847.1 1580589 g61465 i0 42 1.43157894736842 88 50 92.6 1 275 12 216 302 KAH3722847.1 thioredoxin 1 [Pelomyxa schiedti] diamond 408 85.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26758184 26758184 PRJNA352850_P_NODE_63741_length_287_cov_1.747899_g60908_i0 PRJNA352850 63741 287 1.747899 5.01647013 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 92.4 2.22e-19   NR KAH3743669.1 1580589 g60908 i0 48 1.04529616724739 100 47 99.3 1 287 3 871 970 KAH3743669.1 protein mono-ADP-ribosyltransferase PARP6 [Pelomyxa schiedti] diamond 300 92.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26853542 26853542 PRJNA352850_P_NODE_72861_length_263_cov_0.953271_g70028_i0 PRJNA352850 72861 263 0.953271 2.50710273 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.2 0.00273   NR XP_004348706.1 1257118 g70028 i0 40.8 1.11787072243346 49 29 55.9 0 239 93 338 386 XP_004348706.1 uncharacterized protein ACA1_126730 [Acanthamoeba castellanii str. Neff] diamond 294 46.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27422709 27422709 PRJNA352850_P_NODE_33903_length_448_cov_3.428571_g31073_i0 PRJNA352850 33903 448 3.428571 15.35999808 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 65.9 3.19e-9   NR XP_004339528.1 1257118 g31073 i0 37.1 0.703125 105 61 67 1 397 98 2745 2849 XP_004339528.1 HEAT repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 315 65.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27485623 27485623 PRJNA352850_P_NODE_17143_length_726_cov_4.344165_g14461_i0 PRJNA352850 17143 726 4.344165 31.5386379 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 186 3.5199999999999996e-52   NR XP_012755355.1 1410327 g14461 i0 44.8 0.801652892561983 194 97 80.2 4 54 635 257 440 XP_012755355.1 hypothetical protein SAMD00019534_044110 [Acytostelium subglobosum LB1] diamond 582 186 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27895973 27895973 PRJNA352850_P_NODE_28805_length_502_cov_5.889625_g25979_i0 PRJNA352850 28805 502 5.889625 29.5659175 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 208 4.33e-61   NR XP_004358064.1 1257118 g25979 i0 70.3 0.884462151394422 148 43 87.8 1 17 457 431 578 XP_004358064.1 HEAT repeat containing protein, partial [Acanthamoeba castellanii str. Neff] diamond 444 208 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28274855 28274855 PRJNA352850_P_NODE_41006_length_393_cov_1.662791_g38174_i0 PRJNA352850 41006 393 1.662791 6.53476863 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 137 5.4799999999999994e-37   NR PRP84833.1 1890364 g38174 i0 55.4 0.99236641221374 130 53 95.4 2 1 375 134 263 PRP84833.1 hypothetical protein PROFUN_07487 [Planoprotostelium fungivorum] diamond 390 137 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29853763 29853763 PRJNA352850_P_NODE_46271_length_360_cov_4.064309_g43438_i0 PRJNA352850 46271 360 4.064309 14.6315124 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 114 3.4200000000000003e-29   NR XP_004352065.1 1257118 g43438 i0 52.1 1.00833333333333 121 56 100 2 1 360 54 173 XP_004352065.1 ribosomal protein S7e, putative [Acanthamoeba castellanii str. Neff] diamond 363 114 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30043160 30043160 PRJNA352850_P_NODE_5511_length_1700_cov_4.203513_g3812_i0 PRJNA352850 5511 1700 4.203513 71.459721 Dictyostelium purpureum 5786 Evosea other_Eukaryota 369 3.62e-117   NR XP_003284160.1 5786 g3812 i0 38.9 1.97470588235294 561 325 97.9 12 3 1667 42 590 XP_003284160.1 uncharacterized protein DICPUDRAFT_27222 [Dictyostelium purpureum] diamond 3357 369 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30391247 30391247 PRJNA352850_P_NODE_65193_length_282_cov_3.296137_g62360_i0 PRJNA352850 65193 282 3.296137 9.29510634 Cavenderia fasciculata 261658 Evosea other_Eukaryota 50.4 9.47e-5   NR XP_004355166.1 261658 g62360 i0 44.4 0.478723404255319 45 25 47.9 0 145 279 155 199 XP_004355166.1 uncharacterized protein DFA_07670 [Cavenderia fasciculata] diamond 135 50.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30485601 30485601 PRJNA352850_P_NODE_23593_length_577_cov_4.568182_g20782_i0 PRJNA352850 23593 577 4.568182 26.35841014 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 172 4.88e-48   NR PRP80250.1 1890364 g20782 i0 54.5 0.811091854419411 156 57 79.5 4 3 461 301 445 PRP80250.1 hypothetical protein PROFUN_12189 [Planoprotostelium fungivorum] diamond 468 172 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32872941 32872941 PRJNA352850_P_NODE_27860_length_514_cov_3.739785_g25036_i0 PRJNA352850 27860 514 3.739785 19.2224949 Eumycetozoa 142796 Evosea other_Eukaryota 231 4.649999999999999e-72   NR XP_001134587.1 352472 g25036 i0 73.6 2.58560311284047 148 39 86.4 0 3 446 220 367 XP_001134587.1 4-hydroxyphenylpyruvate dioxygenase [Dictyostelium discoideum AX4] diamond 1329 231 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;