RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA352610" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA352610 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
394187 394187 PRJNA352610_P_NODE_9421_length_377_cov_1.519737_g9360_i0 PRJNA352610 9421 377 1.519737 5.72940849 Diadema antillarum 105358 Echinodermata other_Eukaryota 202 6.29e-61   NR XP_071508988.1 105358 g9360 i0 81 8.0132625994695 126 23 99.5 1 2 376 13 138 XP_071508988.1 alpha-enolase-like [Diadema antillarum] diamond 3021 202 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
5497367 5497367 PRJNA352610_P_NODE_17785_length_295_cov_1.036036_g17724_i0 PRJNA352610 17785 295 1.036036 3.0563062 Metazoa 33208 Echinodermata other_Eukaryota 158 1.73e-44   NR KAJ8040006.1 206669 g17724 i0 74.5 6.95593220338983 98 25 99.7 0 1 294 28 125 KAJ8040006.1 Calreticulin [Holothuria leucospilota] diamond 2052 158 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
16970919 16970919 PRJNA352610_P_NODE_10234_length_365_cov_2.626712_g10173_i0 PRJNA352610 10234 365 2.626712 9.5874988 Metazoa 33208 Echinodermata other_Eukaryota 185 1.6299999999999997e-57   NR XP_011681371.1 7668 g10173 i0 88.5 23.1616438356164 104 12 85.5 0 2 313 18 121 XP_011681371.1 40S ribosomal protein S26 isoform X1 [Strongylocentrotus purpuratus] diamond 8454 186 0.99462365591397806 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
16971069 16971069 PRJNA352610_P_NODE_1714_length_714_cov_1.667707_g1658_i0 PRJNA352610 1714 714 1.667707 11.90742798 Metazoa 33208 Echinodermata other_Eukaryota 323 1.86e-105   NR XP_041459615.1 7654 g1658 i0 69 8.6218487394958 232 69 96.2 1 26 712 8 239 XP_041459615.1 mitochondrial-processing peptidase subunit beta-like [Lytechinus variegatus] diamond 6156 323 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
18245784 18245784 PRJNA352610_P_NODE_9735_length_373_cov_0.900000_g9674_i0 PRJNA352610 9735 373 0.9 3.357 Anneissia japonica 1529436 Echinodermata other_Eukaryota 192 5.25e-60   NR XP_033125740.1 1529436 g9674 i0 80.6 4.98659517426273 124 24 99.7 0 2 373 40 163 XP_033125740.1 60S ribosomal protein L19-like [Anneissia japonica] diamond 1860 192 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
24619783 24619783 PRJNA352610_P_NODE_13100_length_333_cov_0.830769_g13039_i0 PRJNA352610 13100 333 0.830769 2.76646077 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 174 3.58e-49   NR KAJ8028584.1 206669 g13039 i0 76.4 3.9009009009009 110 26 99.1 0 3 332 401 510 KAJ8028584.1 Amidophosphoribosyltransferase [Holothuria leucospilota] diamond 1299 174 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
24619940 24619940 PRJNA352610_P_NODE_21420_length_272_cov_1.160804_g21359_i0 PRJNA352610 21420 272 1.160804 3.15738688 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 156 4.99e-42   NR XP_030842641.1 7668 g21359 i0 77.5 2.94485294117647 89 20 98.2 0 270 4 463 551 XP_030842641.1 coatomer subunit beta' [Strongylocentrotus purpuratus] diamond 801 156 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
26821798 26821798 PRJNA352610_P_NODE_3101_length_573_cov_3.406000_g3040_i0 PRJNA352610 3101 573 3.406 19.51638 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 53.5 1.28e-5   NR XP_030845209.1 7668 g3040 i0 31.5 1.20418848167539 111 72 57.1 3 515 189 1 109 XP_030845209.1 uncharacterized protein LOC105439427 [Strongylocentrotus purpuratus] diamond 690 53.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
27106234 27106234 PRJNA352610_P_NODE_27322_length_248_cov_0.880000_g27261_i0 PRJNA352610 27322 248 0.88 2.1824 Anneissia japonica 1529436 Echinodermata other_Eukaryota 47.4 9.24e-4   NR XP_033112027.1 1529436 g27261 i0 37.3 1.28225806451613 51 31 60.5 1 8 157 171 221 XP_033112027.1 tyrosine-protein kinase SYK-like [Anneissia japonica] diamond 318 47.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
27137571 27137571 PRJNA352610_P_NODE_27142_length_248_cov_0.880000_g27081_i0 PRJNA352610 27142 248 0.88 2.1824 Diadema antillarum 105358 Echinodermata other_Eukaryota 80.1 2.8e-16   NR XP_071484361.1 105358 g27081 i0 66.7 3.15725806451613 66 19 78.6 2 246 52 147 210 XP_071484361.1 ras-related protein Rab-6A isoform X2 [Diadema antillarum] diamond 783 80.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
27201009 27201009 PRJNA352610_P_NODE_17842_length_294_cov_1.891403_g17781_i0 PRJNA352610 17842 294 1.891403 5.56072482 Acanthaster planci 133434 Echinodermata other_Eukaryota 90.9 4.93e-20   NR XP_022089604.1 133434 g17781 i0 52.4 5.55102040816327 84 39 85.7 1 34 285 7 89 XP_022089604.1 thiopurine S-methyltransferase-like isoform X1 [Acanthaster planci] diamond 1632 90.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
28639611 28639611 PRJNA352610_P_NODE_19247_length_285_cov_1.452830_g19186_i0 PRJNA352610 19247 285 1.45283 4.1405655 Metazoa 33208 Echinodermata other_Eukaryota 129 3.32e-32   NR XP_041477903.1 7654 g19186 i0 77.8 28.0421052631579 72 16 75.8 0 285 70 1091 1162 XP_041477903.1 splicing factor 3B subunit 1-like isoform X2 [Lytechinus variegatus] diamond 7992 129 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
28748503 28748503 PRJNA352610_P_NODE_16087_length_308_cov_0.804255_g16026_i0 PRJNA352610 16087 308 0.804255 2.4771054 Anneissia japonica 1529436 Echinodermata other_Eukaryota 106 1.18e-26   NR XP_033097064.1 1529436 g16026 i0 59.3 0.788961038961039 81 33 78.9 0 307 65 74 154 XP_033097064.1 thioredoxin domain-containing protein 12-like [Anneissia japonica] diamond 243 106 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
28874785 28874785 PRJNA352610_P_NODE_16848_length_302_cov_0.934498_g16787_i0 PRJNA352610 16848 302 0.934498 2.82218396 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 64.7 6.02e-10   NR XP_041475269.1 7654 g16787 i0 60.4 0.47682119205298 48 19 47.7 0 299 156 190 237 XP_041475269.1 ATP-dependent Clp protease proteolytic subunit, mitochondrial-like [Lytechinus variegatus] diamond 144 64.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
29064432 29064432 PRJNA352610_P_NODE_28568_length_246_cov_0.890173_g28507_i0 PRJNA352610 28568 246 0.890173 2.18982558 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 53.1 3.08e-6   NR KAJ8031120.1 206669 g28507 i0 31.6 1.91463414634146 79 53 95.1 1 236 3 70 148 KAJ8031120.1 hypothetical protein HOLleu_27741 [Holothuria leucospilota] diamond 471 53.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29159199 29159199 PRJNA352610_P_NODE_7849_length_404_cov_1.290030_g7788_i0 PRJNA352610 7849 404 1.29003 5.2117212 Patiria miniata 46514 Echinodermata other_Eukaryota 107 6.75e-26   NR XP_038061580.1 46514 g7788 i0 50.5 2.27970297029703 101 49 74.3 1 301 2 3 103 XP_038061580.1 glutathione S-transferase theta-1-like [Patiria miniata] diamond 921 107 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
29632261 29632261 PRJNA352610_P_NODE_28170_length_247_cov_0.885057_g28109_i0 PRJNA352610 28170 247 0.885057 2.18609079 Asterias rubens 7604 Echinodermata other_Eukaryota 67 1.1e-10   NR XP_033644148.1 7604 g28109 i0 53.6 1.25101214574899 56 26 68 0 247 80 521 576 XP_033644148.1 sperm-tail PG-rich repeat-containing protein 2-like [Asterias rubens] diamond 309 67 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29758790 29758790 PRJNA352610_P_NODE_27231_length_248_cov_0.880000_g27170_i0 PRJNA352610 27231 248 0.88 2.1824 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 52 1.63e-5   NR KAJ8025562.1 206669 g27170 i0 59 0.943548387096774 39 16 47.2 0 118 2 43 81 KAJ8025562.1 Kv channel-interacting protein 4 [Holothuria leucospilota] diamond 234 52 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29790296 29790296 PRJNA352610_P_NODE_29751_length_244_cov_0.900585_g29690_i0 PRJNA352610 29751 244 0.900585 2.1974274 Asterias rubens 7604 Echinodermata other_Eukaryota 90.9 2.09e-21   NR XP_033624099.1 7604 g29690 i0 58.8 5.87704918032787 80 32 98.4 1 242 3 8 86 XP_033624099.1 ragulator complex protein LAMTOR3-A-like isoform X2 [Asterias rubens] diamond 1434 90.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29839174 29839174 PRJNA352610_P_NODE_2671_length_609_cov_2.227612_g2610_i0 PRJNA352610 2671 609 2.227612 13.56615708 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 186 1.9e-57   NR XP_033644561.1 7604 g2610 i0 78.7 3.19211822660099 108 23 53.2 0 553 230 1 108 XP_033644561.1 peptidyl-prolyl cis-trans isomerase FKBP1B-like [Asterias rubens] diamond 1944 187 0.994652406417112 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29853744 29853744 PRJNA352610_P_NODE_8451_length_392_cov_2.934169_g8390_i0 PRJNA352610 8451 392 2.934169 11.50194248 Diadema antillarum 105358 Echinodermata other_Eukaryota 187 5.89e-59   NR XP_071486067.1 105358 g8390 i0 89.5 31.6454081632653 105 11 80.4 0 7 321 1 105 XP_071486067.1 small ribosomal subunit protein eS26-like [Diadema antillarum] diamond 12405 188 0.99468085106383 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
29917019 29917019 PRJNA352610_P_NODE_4011_length_522_cov_1.380846_g3950_i0 PRJNA352610 4011 522 1.380846 7.20801612 Acanthaster planci 133434 Echinodermata other_Eukaryota 152 3.73e-39   NR XP_022104388.1 133434 g3950 i0 57.6 3.47701149425287 125 53 71.8 0 514 140 744 868 XP_022104388.1 puromycin-sensitive aminopeptidase-like [Acanthaster planci] diamond 1815 152 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
29934172 29934172 PRJNA352610_P_NODE_20151_length_280_cov_1.115942_g20090_i0 PRJNA352610 20151 280 1.115942 3.1246376 Opisthokonta 33154 Echinodermata other_Eukaryota 53.1 1.35e-5   NR XP_030854690.1 7668 g20090 i0 42.3 3.42857142857143 78 45 83.6 0 250 17 3234 3311 XP_030854690.1 cytoplasmic dynein 1 heavy chain 1 [Strongylocentrotus purpuratus] diamond 960 53.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
30359651 30359651 PRJNA352610_P_NODE_30332_length_243_cov_0.905882_g30271_i0 PRJNA352610 30332 243 0.905882 2.20129326 Asterias rubens 7604 Echinodermata other_Eukaryota 46.6 0.00167   NR XP_033638409.1 7604 g30271 i0 37.3 1.5679012345679 59 37 72.8 0 58 234 320 378 XP_033638409.1 neuropilin-1a-like isoform X2 [Asterias rubens] diamond 381 46.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
30502742 30502742 PRJNA352610_P_NODE_28713_length_246_cov_0.890173_g28652_i0 PRJNA352610 28713 246 0.890173 2.18982558 Metazoa 33208 Echinodermata other_Eukaryota 73.6 1.95e-13   NR XP_041469502.1 7654 g28652 i0 53.1 2.26829268292683 64 29 76.8 1 43 231 77 140 XP_041469502.1 copper chaperone for superoxide dismutase-like [Lytechinus variegatus] diamond 558 73.9 0.995940460081191 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
31261077 31261077 PRJNA352610_P_NODE_6995_length_423_cov_1.320000_g6934_i0 PRJNA352610 6995 423 1.32 5.5836 Metazoa 33208 Echinodermata other_Eukaryota 89.4 9.04e-18   NR XP_033628441.1 7604 g6934 i0 69.5 4.85106382978723 59 14 39 1 421 257 29 87 XP_033628441.1 nucleoredoxin-like [Asterias rubens] diamond 2052 89.7 0.996655518394649 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
31356062 31356062 PRJNA352610_P_NODE_13176_length_332_cov_1.104247_g13115_i0 PRJNA352610 13176 332 1.104247 3.66610004 Metazoa 33208 Echinodermata other_Eukaryota 138 4.8100000000000004e-36   NR XP_041484818.1 7654 g13115 i0 60.7 9 112 42 99.4 1 331 2 76 187 XP_041484818.1 squalene monooxygenase-like [Lytechinus variegatus] diamond 2988 139 0.992805755395683 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
31465514 31465514 PRJNA352610_P_NODE_19376_length_284_cov_1.914692_g19315_i0 PRJNA352610 19376 284 1.914692 5.43772528 Asterias rubens 7604 Echinodermata other_Eukaryota 45.8 0.00389   NR XP_033631126.1 7604 g19315 i0 41 1.10915492957746 105 47 98.2 3 5 283 29 130 XP_033631126.1 splicing factor 3A subunit 2-like [Asterias rubens] diamond 315 45.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
31703820 31703820 PRJNA352610_P_NODE_10177_length_366_cov_1.395904_g10116_i0 PRJNA352610 10177 366 1.395904 5.10900864 Metazoa 33208 Echinodermata other_Eukaryota 155 1.85e-41   NR XP_071484019.1 105358 g10116 i0 64.7 6.94262295081967 119 42 97.5 0 8 364 311 429 XP_071484019.1 long-chain-fatty-acid--CoA ligase ACSBG2-like [Diadema antillarum] diamond 2541 155 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32446213 32446213 PRJNA352610_P_NODE_16979_length_301_cov_0.894737_g16918_i0 PRJNA352610 16979 301 0.894737 2.69315837 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 99.4 1.55e-22   NR XP_041482512.1 7654 g16918 i0 63.2 2.25249169435216 76 23 70.8 1 216 4 152 227 XP_041482512.1 ubiquitin-like-conjugating enzyme ATG3 [Lytechinus variegatus] diamond 678 99.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32541159 32541159 PRJNA352610_P_NODE_21439_length_272_cov_1.160804_g21378_i0 PRJNA352610 21439 272 1.160804 3.15738688 Patiria miniata 46514 Echinodermata other_Eukaryota 75.1 2.13e-13   NR XP_038078685.1 46514 g21378 i0 51.4 0.772058823529412 70 33 76.1 1 272 66 432 501 XP_038078685.1 U3 small nucleolar RNA-associated protein 15 homolog [Patiria miniata] diamond 210 75.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
32778396 32778396 PRJNA352610_P_NODE_23880_length_257_cov_1.288043_g23819_i0 PRJNA352610 23880 257 1.288043 3.31027051 root 1 Root_unresolved Root_unresolved 129 8.25e-33   NR XP_063960016.1 7653 g23819 i0 68.2 4.94941634241245 85 27 99.2 0 3 257 126 210 XP_063960016.1 amidase-like [Lytechinus pictus] diamond 1272 129 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;