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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA352610" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA352610 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1668259 1668259 PRJNA352610_P_NODE_12322_length_340_cov_3.041199_g12261_i0 PRJNA352610 12322 340 3.041199 10.3400766 Metazoa 33208 Brachiopoda other_Eukaryota 132 1.23e-37   NR XP_013403352.1 7574 g12261 i0 73.2 32.3558823529412 82 22 72.4 0 30 275 1 82 XP_013403352.1 40S ribosomal protein S21-like [Lingula anatina] diamond 11001 132 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
8723065 8723065 PRJNA352610_P_NODE_25087_length_251_cov_0.865169_g25026_i0 PRJNA352610 25087 251 0.865169 2.17157419 Metazoa 33208 Brachiopoda other_Eukaryota 125 1.44e-31   NR XP_013384439.1 7574 g25026 i0 77.1 1.9840637450199201 83 19 99.2 0 251 3 104 186 XP_013384439.1 T-complex protein 1 subunit zeta [Lingula anatina] diamond 498 125 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
12549037 12549037 PRJNA352610_P_NODE_2650_length_610_cov_3.668529_g2589_i0 PRJNA352610 2650 610 3.668529 22.3780269 Metazoa 33208 Brachiopoda other_Eukaryota 316 1.7899999999999994e-107   NR XP_013399327.1 7574 g2589 i0 79.3 3.81147540983607 193 40 94.9 0 589 11 2 194 XP_013399327.1 40S ribosomal protein S7 [Lingula anatina] diamond 2325 318 0.993710691823899 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
15696569 15696569 PRJNA352610_P_NODE_28813_length_246_cov_0.890173_g28752_i0 PRJNA352610 28813 246 0.890173 2.18982558 Metazoa 33208 Brachiopoda other_Eukaryota 146 6.659999999999999e-40   NR XP_013417150.1 7574 g28752 i0 81.5 3.95121951219512 81 15 98.8 0 245 3 370 450 XP_013417150.1 microfibrillar-associated protein 1 [Lingula anatina] diamond 972 146 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
18245565 18245565 PRJNA352610_P_NODE_28215_length_247_cov_0.804598_g28154_i0 PRJNA352610 28215 247 0.804598 1.98735706 Lingula anatina 7574 Brachiopoda other_Eukaryota 112 9.16e-27   NR XP_013409611.1 7574 g28154 i0 60.5 1.04453441295547 86 30 99.6 2 247 2 2063 2148 XP_013409611.1 zinc finger MYM-type protein 2 [Lingula anatina] diamond 258 112 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
23345955 23345955 PRJNA352610_P_NODE_5899_length_450_cov_1.225464_g5838_i0 PRJNA352610 5899 450 1.225464 5.514588 Lingula anatina 7574 Brachiopoda other_Eukaryota 193 3.83e-60   NR XP_013407215.1 7574 g5838 i0 73.6 3.22 121 32 80.7 0 3 365 47 167 XP_013407215.1 RNA-binding protein 8A [Lingula anatina] diamond 1449 193 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
24619887 24619887 PRJNA352610_P_NODE_1900_length_687_cov_4.429967_g1841_i0 PRJNA352610 1900 687 4.429967 30.43387329 Metazoa 33208 Brachiopoda other_Eukaryota 352 2.979999999999999e-118   NR XP_013389397.1 7574 g1841 i0 77.5 2.97379912663755 227 51 99.1 0 685 5 119 345 XP_013389397.1 60S ribosomal protein L4 [Lingula anatina] diamond 2043 352 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26758166 26758166 PRJNA352610_P_NODE_441_length_1148_cov_1.734884_g423_i0 PRJNA352610 441 1148 1.734884 19.91646832 Lingula anatina 7574 Brachiopoda other_Eukaryota 334 9.04e-107   NR XP_013384044.2 7574 g423 i0 51.3 0.880662020905923 337 151 87 8 1147 149 174 501 XP_013384044.2 lactase-phlorizin hydrolase [Lingula anatina] diamond 1011 334 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27913002 27913002 PRJNA352610_P_NODE_24005_length_256_cov_2.289617_g23944_i0 PRJNA352610 24005 256 2.289617 5.86141952 Metazoa 33208 Brachiopoda other_Eukaryota 80.1 3.18e-15   NR XP_013393954.1 7574 g23944 i0 63.8 2.7421875 58 21 68 0 82 255 950 1007 XP_013393954.1 vigilin [Lingula anatina] diamond 702 80.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28481570 28481570 PRJNA352610_P_NODE_31766_length_241_cov_0.916667_g31705_i0 PRJNA352610 31766 241 0.916667 2.20916747 Metazoa 33208 Brachiopoda other_Eukaryota 108 2.58e-25   NR XP_013416715.1 7574 g31705 i0 62.3 3.84647302904564 77 29 95.9 0 8 238 310 386 XP_013416715.1 lipoxygenase homology domain-containing protein 1 isoform X2 [Lingula anatina] diamond 927 108 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28987010 28987010 PRJNA352610_P_NODE_8128_length_398_cov_2.452308_g8067_i0 PRJNA352610 8128 398 2.452308 9.76018584 Metazoa 33208 Brachiopoda other_Eukaryota 159 6.469999999999999e-47   NR XP_013407261.1 7574 g8067 i0 81.9 20.7889447236181 105 19 79.1 0 82 396 1 105 XP_013407261.1 transcription factor BTF3 homolog 4 [Lingula anatina] diamond 8274 160 0.99375 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29127667 29127667 PRJNA352610_P_NODE_6569_length_432_cov_1.665738_g6508_i0 PRJNA352610 6569 432 1.665738 7.19598816 Lingula anatina 7574 Brachiopoda other_Eukaryota 105 1.24e-24   NR XP_013393400.1 7574 g6508 i0 42.3 3.38194444444444 123 68 84.7 3 429 64 119 239 XP_013393400.1 uncharacterized protein LOC106161089 [Lingula anatina] diamond 1461 105 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29695382 29695382 PRJNA352610_P_NODE_14870_length_317_cov_1.577869_g14809_i0 PRJNA352610 14870 317 1.577869 5.00184473 Lingula anatina 7574 Brachiopoda other_Eukaryota 162 3.47e-46   NR XP_013391205.1 7574 g14809 i0 74 2.95268138801262 104 27 98.4 0 314 3 43 146 XP_013391205.1 proliferation-associated protein 2G4 [Lingula anatina] diamond 936 162 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29695393 29695393 PRJNA352610_P_NODE_20290_length_279_cov_1.121359_g20229_i0 PRJNA352610 20290 279 1.121359 3.12859161 Lingula anatina 7574 Brachiopoda other_Eukaryota 127 3.36e-33   NR XP_013391481.1 7574 g20229 i0 63 1.97849462365591 92 34 98.9 0 278 3 220 311 XP_013391481.1 uncharacterized protein LOC106159668 isoform X3 [Lingula anatina] diamond 552 127 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29744242 29744242 PRJNA352610_P_NODE_16750_length_302_cov_1.672489_g16689_i0 PRJNA352610 16750 302 1.672489 5.05091678 Metazoa 33208 Brachiopoda other_Eukaryota 107 1.17e-27   NR XP_013386384.1 7574 g16689 i0 57.1 3.89403973509934 98 41 97.4 1 297 4 10 106 XP_013386384.1 fatty acid-binding protein, heart [Lingula anatina] diamond 1176 107 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29807553 29807553 PRJNA352610_P_NODE_2211_length_648_cov_2.000000_g2152_i0 PRJNA352610 2211 648 2 12.96 Metazoa 33208 Brachiopoda other_Eukaryota 349 2.569999999999999e-119   NR XP_013403608.1 7574 g2152 i0 81.1 7.06018518518519 217 39 99.5 1 647 3 45 261 XP_013403608.1 40S ribosomal protein S3a [Lingula anatina] diamond 4575 350 0.997142857142857 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30028893 30028893 PRJNA352610_P_NODE_21451_length_272_cov_1.150754_g21390_i0 PRJNA352610 21451 272 1.150754 3.13005088 Metazoa 33208 Brachiopoda other_Eukaryota 158 5.3000000000000003e-45   NR XP_013397292.2 7574 g21390 i0 85.6 11.8676470588235 90 13 99.3 0 270 1 80 169 XP_013397292.2 splicing factor 3A subunit 2-like [Lingula anatina] diamond 3228 159 0.993710691823899 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30345259 30345259 PRJNA352610_P_NODE_15072_length_316_cov_0.950617_g15011_i0 PRJNA352610 15072 316 0.950617 3.00394972 Metazoa 33208 Brachiopoda other_Eukaryota 105 1.1199999999999999e-23   NR XP_013385160.1 7574 g15011 i0 66.7 15.4082278481013 63 21 59.8 0 9 197 283 345 XP_013385160.1 zinc finger protein 608 isoform X1 [Lingula anatina] diamond 4869 105 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30548663 30548663 PRJNA352610_P_NODE_16033_length_308_cov_1.280851_g15972_i0 PRJNA352610 16033 308 1.280851 3.94502108 Lingula anatina 7574 Brachiopoda other_Eukaryota 81.3 2.34e-15   NR XP_013410745.1 7574 g15972 i0 42.9 0.954545454545455 98 51 90.6 1 3 281 519 616 XP_013410745.1 nuclear RNA export factor 1 [Lingula anatina] diamond 294 81.3 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30597347 30597347 PRJNA352610_P_NODE_18973_length_287_cov_1.266355_g18912_i0 PRJNA352610 18973 287 1.266355 3.63443885 Metazoa 33208 Brachiopoda other_Eukaryota 107 1.6099999999999997e-24   NR XP_013397069.2 7574 g18912 i0 55.9 3.88850174216028 93 40 97.2 1 281 3 490 581 XP_013397069.2 cysteine--tRNA ligase, cytoplasmic-like, partial [Lingula anatina] diamond 1116 107 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30660686 30660686 PRJNA352610_P_NODE_28413_length_246_cov_0.890173_g28352_i0 PRJNA352610 28413 246 0.890173 2.18982558 Metazoa 33208 Brachiopoda other_Eukaryota 53.9 4.55e-6   NR XP_013405663.1 7574 g28352 i0 88.5 4.1219512195122 26 3 31.7 0 80 3 5855 5880 XP_013405663.1 hydrocephalus-inducing protein [Lingula anatina] diamond 1014 53.9 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30738197 30738197 PRJNA352610_P_NODE_5574_length_459_cov_6.484456_g5513_i0 PRJNA352610 5574 459 6.484456 29.76365304 Novocrania anomala 317945 Brachiopoda other_Eukaryota 115 2.8199999999999997e-30   NR ACD65133.1 317945 g5513 i0 74.3 0.457516339869281 70 18 45.8 0 81 290 1 70 ACD65133.1 putative 60S ribosomal protein RPLP1 [Novocrania anomala] diamond 210 115 1 Eukaryota Opisthokonta Metazoa Brachiopoda Craniata Craniida Craniidae Novocrania Novocrania anomala
30755513 30755513 PRJNA352610_P_NODE_16814_length_302_cov_1.052402_g16753_i0 PRJNA352610 16814 302 1.052402 3.17825404 Metazoa 33208 Brachiopoda other_Eukaryota 122 3.74e-31   NR XP_013382245.1 7574 g16753 i0 56.1 4.88741721854305 98 42 97.4 1 9 302 101 197 XP_013382245.1 tumor suppressor candidate 3 [Lingula anatina] diamond 1476 122 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30928011 30928011 PRJNA352610_P_NODE_4034_length_521_cov_1.363839_g3973_i0 PRJNA352610 4034 521 1.363839 7.10560119 Lingula anatina 7574 Brachiopoda other_Eukaryota 162 1.5499999999999998e-48   NR XP_013406842.1 7574 g3973 i0 76.9 1.19769673704415 104 24 59.9 0 499 188 1 104 XP_013406842.1 c-Myc-binding protein-like [Lingula anatina] diamond 624 162 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31180302 31180302 PRJNA352610_P_NODE_7575_length_410_cov_1.516320_g7514_i0 PRJNA352610 7575 410 1.51632 6.216912 Lingula anatina 7574 Brachiopoda other_Eukaryota 98.2 1.47e-21   NR XP_013419820.1 7574 g7514 i0 40.6 1.00975609756098 138 64 99.5 2 3 410 121 242 XP_013419820.1 uncharacterized protein LOC106180388 [Lingula anatina] diamond 414 98.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31370623 31370623 PRJNA352610_P_NODE_29996_length_244_cov_0.900585_g29935_i0 PRJNA352610 29996 244 0.900585 2.1974274 Lingula anatina 7574 Brachiopoda other_Eukaryota 94.4 2.6e-20   NR XP_013387421.1 7574 g29935 i0 56.8 0.995901639344262 81 35 99.6 0 2 244 427 507 XP_013387421.1 tether containing UBX domain for GLUT4 isoform X2 [Lingula anatina] diamond 243 94.4 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31876307 31876307 PRJNA352610_P_NODE_10097_length_367_cov_1.625850_g10036_i0 PRJNA352610 10097 367 1.62585 5.9668695 Lingula anatina 7574 Brachiopoda other_Eukaryota 102 1.09e-22   NR XP_013381935.1 7574 g10036 i0 35.5 0.989100817438692 121 77 98.1 1 362 3 232 352 XP_013381935.1 indolethylamine N-methyltransferase-like [Lingula anatina] diamond 363 102 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32178600 32178600 PRJNA352610_P_NODE_10698_length_360_cov_0.794425_g10637_i0 PRJNA352610 10698 360 0.794425 2.85993 Metazoa 33208 Brachiopoda other_Eukaryota 162 6.06e-48   NR XP_013395948.1 7574 g10637 i0 62.2 24.8083333333333 119 45 99.2 0 358 2 30 148 XP_013395948.1 eukaryotic translation initiation factor 3 subunit K [Lingula anatina] diamond 8931 162 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32210068 32210068 PRJNA352610_P_NODE_18718_length_289_cov_0.949074_g18657_i0 PRJNA352610 18718 289 0.949074 2.74282386 Metazoa 33208 Brachiopoda other_Eukaryota 103 3.8299999999999997e-23   NR XP_023932627.1 7574 g18657 i0 50 4.86851211072664 92 46 95.5 0 2 277 319 410 XP_023932627.1 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like [Lingula anatina] diamond 1407 103 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32210082 32210082 PRJNA352610_P_NODE_8258_length_396_cov_0.950464_g8197_i0 PRJNA352610 8258 396 0.950464 3.76383744 Metazoa 33208 Brachiopoda other_Eukaryota 132 3.12e-36   NR XP_013386986.1 7574 g8197 i0 70.8 12.1136363636364 89 26 67.4 0 269 3 29 117 XP_013386986.1 protein max [Lingula anatina] diamond 4797 132 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32224625 32224625 PRJNA352610_P_NODE_30098_length_244_cov_0.877193_g30037_i0 PRJNA352610 30098 244 0.877193 2.14035092 Lingula anatina 7574 Brachiopoda other_Eukaryota 107 1.06e-25   NR XP_013390336.1 7574 g30037 i0 56.8 1.99180327868852 81 35 99.6 0 1 243 128 208 XP_013390336.1 RNA-binding protein squid isoform X2 [Lingula anatina] diamond 486 107 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32683969 32683969 PRJNA352610_P_NODE_25020_length_251_cov_0.865169_g24959_i0 PRJNA352610 25020 251 0.865169 2.17157419 Metazoa 33208 Brachiopoda other_Eukaryota 124 2.4799999999999996e-31   NR XP_013409543.1 7574 g24959 i0 64.2 50.3665338645418 81 29 96.8 0 8 250 173 253 XP_013409543.1 UDP-N-acetylhexosamine pyrophosphorylase isoform X6 [Lingula anatina] diamond 12642 125 0.992 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;