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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA352610" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 31 ✖

bioproject 1

  • PRJNA352610 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27154740 27154740 PRJNA352610_P_NODE_31262_length_242_cov_0.911243_g31201_i0 PRJNA352610 31262 242 0.911243 2.20520806 Rariglobus 2706524 Bacteria Bacteria 43.1 0.0222   NR HNC24174.1 2006848 g31201 i0 48.9 2.10743801652893 45 23 55.8 0 239 105 177 221 HNC24174.1 hypothetical protein [Opitutaceae bacterium] diamond 510 43.5 0.990804597701149 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
27169358 27169358 PRJNA352610_P_NODE_12682_length_337_cov_1.102273_g12621_i0 PRJNA352610 12682 337 1.102273 3.71466001 Parachlamydiales bacterium 2052178 Bacteria Bacteria 44.7 0.0189   NR MBF8262517.1 2052178 g12621 i0 45.9 0.329376854599407 37 20 32.9 0 115 225 169 205 MBF8262517.1 putative rane protein [Parachlamydiales bacterium] diamond 111 44.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
27232826 27232826 PRJNA352610_P_NODE_8903_length_385_cov_1.259615_g8842_i0 PRJNA352610 8903 385 1.259615 4.84951775 Planctomycetes bacterium DG_58 1703415 Bacteria Bacteria 61.6 1.75e-9   NR KPJ57801.1 1703415 g8842 i0 41.4 1.23116883116883 70 41 54.5 0 76 285 4 73 KPJ57801.1 MAG: stage V sporulation protein S [Planctomycetes bacterium DG_58] diamond 474 61.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium DG_58
27359434 27359434 PRJNA352610_P_NODE_18443_length_290_cov_1.525346_g18382_i0 PRJNA352610 18443 290 1.525346 4.4235034 Planctomycetia bacterium 2052181 Bacteria Bacteria 92.4 6.02e-20   NR MEI7700350.1 2052181 g18382 i0 63.8 0.713793103448276 69 24 70.3 1 290 87 257 325 MEI7700350.1 aldo/keto reductase [Planctomycetia bacterium] diamond 207 92.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia       Planctomycetia bacterium
27580242 27580242 PRJNA352610_P_NODE_18724_length_289_cov_0.893519_g18663_i0 PRJNA352610 18724 289 0.893519 2.58226991 Planctomycetes bacterium K23_9 1930275 Bacteria Bacteria 68.2 7.55e-11   NR QDT09256.1 1930275 g18663 i0 44.4 0.934256055363322 90 42 92.4 3 17 283 103 185 QDT09256.1 Deoxyribodipyrimidine photo-lyase [Planctomycetes bacterium K23_9] diamond 270 68.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Stieleria Stieleria marina
27707003 27707003 PRJNA352610_P_NODE_13284_length_331_cov_1.000000_g13223_i0 PRJNA352610 13284 331 1 3.31 Planctomycetota bacterium 2026780 Bacteria Bacteria 45.8 0.00839   NR MEM9066714.1 2026780 g13223 i0 40.5 0.670694864048338 74 38 63.4 3 330 121 362 433 MEM9066714.1 ATP-binding protein [Planctomycetota bacterium] diamond 222 45.8 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27801460 27801460 PRJNA352610_P_NODE_3364_length_556_cov_0.956522_g3303_i0 PRJNA352610 3364 556 0.956522 5.31826232 Rubripirellula amarantea 2527999 Bacteria Bacteria 117 3.61e-28   NR WP_146515863.1 2527999 g3303 i0 44.4 1.79136690647482 169 73 87.9 7 67 555 89 242 WP_146515863.1 archaemetzincin [Rubripirellula amarantea] diamond 996 117 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rubripirellula Rubripirellula amarantea
27832843 27832843 PRJNA352610_P_NODE_25744_length_250_cov_0.870056_g25683_i0 PRJNA352610 25744 250 0.870056 2.17514 Planctomycetota bacterium 2026780 Bacteria Bacteria 46.6 0.00177   NR MDI6788027.1 2026780 g25683 i0 39.3 0.672 56 31 67.2 1 246 79 240 292 MDI6788027.1 hypothetical protein [Planctomycetota bacterium] diamond 168 46.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27864354 27864354 PRJNA352610_P_NODE_32065_length_241_cov_0.904762_g32004_i0 PRJNA352610 32065 241 0.904762 2.18047642 Opitutia bacterium 2026771 Bacteria Bacteria 43.1 0.0265   NR MBI5382792.1 2026771 g32004 i0 36.1 0.759336099585062 61 31 75.9 1 193 11 385 437 MBI5382792.1 DegQ family serine endoprotease [Opitutia bacterium] diamond 183 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
27927658 27927658 PRJNA352610_P_NODE_7345_length_415_cov_1.283626_g7284_i0 PRJNA352610 7345 415 1.283626 5.3270479 Candidatus Brocadiia bacterium 2517210 Bacteria Bacteria 74.3 2.44e-12   NR MFA5795455.1 2517210 g7284 i0 47.4 1.1421686746988 78 40 56.4 1 24 257 172 248 MFA5795455.1 DUF2341 domain-containing protein [Candidatus Brocadiia bacterium] diamond 474 74.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia       Candidatus Brocadiia bacterium
28590819 28590819 PRJNA352610_P_NODE_2567_length_618_cov_1.251376_g2507_i0 PRJNA352610 2567 618 1.251376 7.73350368 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 128 1.85e-30   NR HXI84029.1 2499141 g2507 i0 54.5 0.650485436893204 134 54 64.1 4 616 221 162 290 HXI84029.1 NF038122 family metalloprotease [Verrucomicrobiia bacterium] diamond 402 128 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28969594 28969594 PRJNA352610_P_NODE_16908_length_301_cov_1.350877_g16847_i0 PRJNA352610 16908 301 1.350877 4.06613977 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 68.9 2.72e-11   NR MBQ7188093.1 2212473 g16847 i0 41.8 3.51827242524917 91 47 90.7 2 2 274 208 292 MBQ7188093.1 SDR family oxidoreductase [Kiritimatiellia bacterium] diamond 1059 68.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29190700 29190700 PRJNA352610_P_NODE_28929_length_245_cov_1.389535_g28868_i0 PRJNA352610 28929 245 1.389535 3.40436075 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 90.5 5.63e-19   NR RME94189.1 2026799 g28868 i0 60.3 1.70204081632653 68 27 83.3 0 226 23 479 546 RME94189.1 MAG: beta-N-acetylglucosaminidase [Verrucomicrobiota bacterium] diamond 417 90.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29285122 29285122 PRJNA352610_P_NODE_13389_length_330_cov_1.112840_g13328_i0 PRJNA352610 13389 330 1.11284 3.672372 Planctomycetota bacterium 2026780 Bacteria Bacteria 143 1e-39   NR MEI8211937.1 2026780 g13328 i0 61.8 1.98181818181818 110 42 100 0 1 330 148 257 MEI8211937.1 GDSL-type esterase/lipase family protein [Planctomycetota bacterium] diamond 654 143 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29442941 29442941 PRJNA352610_P_NODE_4890_length_484_cov_1.464720_g4829_i0 PRJNA352610 4890 484 1.46472 7.0892448 Phycisphaerae bacterium 2026778 Bacteria Bacteria 50.1 0.00117   NR MDP6635815.1 2026778 g4829 i0 45.5 1.63636363636364 44 24 27.3 0 483 352 526 569 MDP6635815.1 WD40 repeat domain-containing protein [Phycisphaerae bacterium] diamond 792 50.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
29758772 29758772 PRJNA352610_P_NODE_12691_length_337_cov_0.969697_g12630_i0 PRJNA352610 12691 337 0.969697 3.26787889 Schlesneria sp. 2762018 Bacteria Bacteria 53.1 2.56e-5   NR MDB5342565.1 2762018 g12630 i0 44.1 1.01483679525223 59 30 49.9 1 336 169 638 696 MDB5342565.1 domain S-box protein [Schlesneria sp.] diamond 342 53.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Schlesneria Schlesneria sp.
29758777 29758777 PRJNA352610_P_NODE_17031_length_300_cov_1.356828_g16970_i0 PRJNA352610 17031 300 1.356828 4.070484 Planctomycetota bacterium 2026780 Bacteria Bacteria 98.6 1.2300000000000002e-21   NR MCX8229914.1 2026780 g16970 i0 65.7 0.7 70 24 70 0 210 1 1 70 MCX8229914.1 tryptophanase [Planctomycetota bacterium] diamond 210 98.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29948482 29948482 PRJNA352610_P_NODE_8511_length_392_cov_0.965517_g8450_i0 PRJNA352610 8511 392 0.965517 3.78482664 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 46.2 0.0101   NR NLS95284.1 2026779 g8450 i0 29.6 0.619897959183674 81 51 58.2 2 27 254 164 243 NLS95284.1 hypothetical protein [Planctomycetaceae bacterium] diamond 243 46.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
30454200 30454200 PRJNA352610_P_NODE_31093_length_242_cov_0.911243_g31032_i0 PRJNA352610 31093 242 0.911243 2.20520806 Gemmataceae bacterium 2052164 Bacteria Bacteria 44.7 0.00757   NR MCI0460070.1 2052164 g31032 i0 40.3 0.768595041322314 62 36 75.6 1 54 236 130 191 MCI0460070.1 protein kinase [Gemmataceae bacterium] diamond 186 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
30643356 30643356 PRJNA352610_P_NODE_8913_length_385_cov_1.176282_g8852_i0 PRJNA352610 8913 385 1.176282 4.5286857 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 70.1 1.61e-11   NR HEU6448320.1 2499141 g8852 i0 60.4 0.412987012987013 53 20 41.3 1 1 159 192 243 HEU6448320.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 159 70.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30833064 30833064 PRJNA352610_P_NODE_22034_length_268_cov_1.297436_g21973_i0 PRJNA352610 22034 268 1.297436 3.47712848 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.7 0.0338   NR MBN8643622.1 2026780 g21973 i0 39.2 0.828358208955224 74 41 82.8 2 264 43 41 110 MBN8643622.1 hypothetical protein [Planctomycetota bacterium] diamond 222 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31054554 31054554 PRJNA352610_P_NODE_9135_length_382_cov_0.919094_g9074_i0 PRJNA352610 9135 382 0.919094 3.51093908 Gemmataceae bacterium 2052164 Bacteria Bacteria 45.8 0.0128   NR MFQ3591582.1 2052164 g9074 i0 32.7 0.816753926701571 104 68 80.1 1 50 355 179 282 MFQ3591582.1 site-2 protease family protein [Gemmataceae bacterium] diamond 312 45.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
31338666 31338666 PRJNA352610_P_NODE_25656_length_250_cov_0.932203_g25595_i0 PRJNA352610 25656 250 0.932203 2.3305075 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.1 0.0298   NR MBS0266803.1 2026780 g25595 i0 33.3 0.9 75 46 85.2 1 215 3 813 887 MBS0266803.1 tetratricopeptide repeat protein [Planctomycetota bacterium] diamond 225 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31433557 31433557 PRJNA352610_P_NODE_31236_length_242_cov_0.911243_g31175_i0 PRJNA352610 31236 242 0.911243 2.20520806 Phycisphaerae bacterium 2026778 Bacteria Bacteria 81.6 4.71e-16   NR MCG3131301.1 2026778 g31175 i0 47.5 2.93801652892562 80 41 99.2 1 241 2 22 100 MCG3131301.1 Carnitine monooxygenase oxygenase subunit [Phycisphaerae bacterium] diamond 711 81.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
31844732 31844732 PRJNA352610_P_NODE_857_length_908_cov_1.258683_g819_i0 PRJNA352610 857 908 1.258683 11.42884164 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 188 1.68e-52   NR HEY7091130.1 2876886 g819 i0 51.1 0.57488986784141 174 85 57.5 0 879 358 177 350 HEY7091130.1 glycoside hydrolase family 28 protein [Tepidisphaeraceae bacterium] diamond 522 188 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
31939614 31939614 PRJNA352610_P_NODE_24717_length_252_cov_1.575419_g24656_i0 PRJNA352610 24717 252 1.575419 3.97005588 Planctomycetota bacterium 2026780 Bacteria Bacteria 139 1.11e-38   NR MEI8211937.1 2026780 g24656 i0 71.1 0.988095238095238 83 24 98.8 0 4 252 101 183 MEI8211937.1 GDSL-type esterase/lipase family protein [Planctomycetota bacterium] diamond 249 139 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32161424 32161424 PRJNA352610_P_NODE_3898_length_528_cov_1.742857_g3837_i0 PRJNA352610 3898 528 1.742857 9.20228496 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 135 4.429999999999999e-35   NR MCP4194714.1 2026779 g3837 i0 43 1.01704545454545 179 94 98.3 4 521 3 108 284 MCP4194714.1 DNA (cytosine-5-)-methyltransferase [Planctomycetaceae bacterium] diamond 537 135 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
32178609 32178609 PRJNA352610_P_NODE_3458_length_551_cov_1.303347_g3397_i0 PRJNA352610 3458 551 1.303347 7.18144197 Planctomycetota 203682 Bacteria Bacteria 99.8 2.76e-21   NR HEY2880913.1 2715253 g3397 i0 39 5.90744101633394 182 88 92 6 34 540 79 250 HEY2880913.1 pectinesterase family protein [Pirellulales bacterium] diamond 3255 99.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
32224602 32224602 PRJNA352610_P_NODE_16938_length_301_cov_1.122807_g16877_i0 PRJNA352610 16938 301 1.1228070000000001 3.37964907 Planctomycetota bacterium 2026780 Bacteria Bacteria 45.8 0.00621   NR MCD4656879.1 2026780 g16877 i0 37.3 0.747508305647841 75 40 67.8 2 291 88 130 204 MCD4656879.1 WD40 repeat domain-containing protein [Planctomycetota bacterium] diamond 225 45.8 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32477835 32477835 PRJNA352610_P_NODE_7839_length_404_cov_1.773414_g7778_i0 PRJNA352610 7839 404 1.773414 7.16459256 Roseibacillus persicicus 454148 Bacteria Bacteria 51.6 1.79e-4   NR WP_308988555.1 454148 g7778 i0 45.2 1.38118811881188 62 31 46 1 188 3 86 144 WP_308988555.1 family 16 glycoside hydrolase [Roseibacillus persicicus] diamond 558 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Roseibacillus Roseibacillus persicicus
32841421 32841421 PRJNA352610_P_NODE_24920_length_251_cov_1.297753_g24859_i0 PRJNA352610 24920 251 1.297753 3.25736003 Pseudomonadati 3379134 Bacteria Bacteria 70.9 4.89e-12   NR MEZ0229551.1 2026780 g24859 i0 46.7 6.37051792828685 75 39 89.6 1 238 14 227 300 MEZ0229551.1 cytochrome P450 [Planctomycetota bacterium] diamond 1599 70.9 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;