RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA348537" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA348537 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27611966 27611966 PRJNA348537_S_NODE_2384_length_196_cov_4.335404_g2338_i0 PRJNA348537 2384 196 4.335404 8.49739184 Caudoviricetes sp. 2832643 Viruses Viruses 98.6 4.38e-22   NR DAM41230.1 2832643 g2338 i0 79 0.948979591836735 62 13 94.9 0 187 2 78 139 DAM41230.1 MAG TPA: DNA polymerase B, partial [Caudoviricetes sp.] diamond 186 98.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28116929 28116929 PRJNA348537_S_NODE_505_length_384_cov_3.816619_g459_i0 PRJNA348537 505 384 3.816619 14.65581696 Caudoviricetes sp. 2832643 Viruses Viruses 127 9.29e-34   NR DAM41232.1 2832643 g459 i0 55.2 0.9765625 125 56 97.7 0 378 4 62 186 DAM41232.1 MAG TPA: head to tail adaptor [Caudoviricetes sp.] diamond 375 127 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32161391 32161391 PRJNA348537_S_NODE_1238_length_261_cov_5.977876_g1192_i0 PRJNA348537 1238 261 5.977876 15.60225636 Caudoviricetes sp. 2832643 Viruses Viruses 156 3.63e-44   NR DAM41229.1 2832643 g1192 i0 83.9 1 87 14 100 0 1 261 63 149 DAM41229.1 MAG TPA: DNA encapsidation protein, partial [Caudoviricetes sp.] diamond 261 156 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;