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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA340009" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA340009 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6770254 6770254 PRJNA340009_P_NODE_906_length_968_cov_2.215452_g681_i0 PRJNA340009 906 968 2.215452 21.44557536 root 1 Root_unresolved Root_unresolved 390 1.4699999999999995e-129   NR XP_005099373.3 6500 g681 i0 70.9 45.551652892562 265 77 82.1 0 174 968 35 299 XP_005099373.3 propionyl-CoA carboxylase beta chain, mitochondrial [Aplysia californica] diamond 44094 392 0.994897959183674 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
26870794 26870794 PRJNA340009_P_NODE_12121_length_335_cov_1.006993_g11814_i0 PRJNA340009 12121 335 1.006993 3.37342655 Opisthokonta 33154 Mollusca Mollusca 67.8 1.81e-10   NR CAL1535444.1 6523 g11814 i0 42.5 3.65373134328358 80 39 71.6 1 328 89 730 802 CAL1535444.1 unnamed protein product, partial [Lymnaea stagnalis] diamond 1224 68.2 0.994134897360704 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
29316801 29316801 PRJNA340009_P_NODE_63389_length_166_cov_4.324786_g63082_i0 PRJNA340009 63389 166 4.324786 7.17914476 Pecten maximus 6579 Mollusca Mollusca 49.3 3.87e-5   NR XP_033725222.1 6579 g63082 i0 53.2 0.849397590361446 47 21 84.9 1 158 18 115 160 XP_033725222.1 uncharacterized protein LOC117315187 [Pecten maximus] diamond 141 49.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
29916899 29916899 PRJNA340009_P_NODE_25611_length_243_cov_2.417526_g25304_i0 PRJNA340009 25611 243 2.417526 5.87458818 Mya arenaria 6604 Mollusca Mollusca 73.2 4.38e-13   NR XP_052776588.1 6604 g25304 i0 62.3 1.30864197530864 53 20 65.4 0 169 11 213 265 XP_052776588.1 UDP-sugar transporter sqv-7-like [Mya arenaria] diamond 318 73.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
30359545 30359545 PRJNA340009_P_NODE_33352_length_217_cov_2.428571_g33045_i0 PRJNA340009 33352 217 2.428571 5.26999907 Haliotis rufescens 6454 Mollusca Mollusca 44.7 0.00583   NR XP_048248442.1 6454 g33045 i0 41.5 0.732718894009217 53 31 73.3 0 58 216 386 438 XP_048248442.1 WD repeat and FYVE domain-containing protein 3-like isoform X1 [Haliotis rufescens] diamond 159 44.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
30502719 30502719 PRJNA340009_P_NODE_7853_length_398_cov_50.378223_g7546_i0 PRJNA340009 7853 398 50.378223 200.50532754 root 1 Root_unresolved Root_unresolved 173 1.69e-52   NR XP_033735668.1 6579 g7546 i0 85.7 14.035175879397 98 14 73.9 0 397 104 67 164 XP_033735668.1 peptidyl-prolyl cis-trans isomerase-like [Pecten maximus] diamond 5586 173 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
30611691 30611691 PRJNA340009_P_NODE_55193_length_175_cov_8.626984_g54886_i0 PRJNA340009 55193 175 8.626984 15.097222 Mactra antiquata 2302425 Mollusca Mollusca 57.8 1.91e-8   NR KAL4235966.1 2302425 g54886 i0 55.1 1.68 49 22 84 0 175 29 70 118 KAL4235966.1 Transmembrane protein 18 [Mactra antiquata] diamond 294 57.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Mactridae Mactra Mactra antiquata
31054444 31054444 PRJNA340009_P_NODE_23435_length_252_cov_2.261084_g23128_i0 PRJNA340009 23435 252 2.261084 5.69793168 Candidula unifasciata 100452 Mollusca Mollusca 47.4 8.74e-4   NR CAG5133355.1 100452 g23128 i0 86.4 0.261904761904762 22 3 26.2 0 86 151 130 151 CAG5133355.1 unnamed protein product [Candidula unifasciata] diamond 66 47.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
31514325 31514325 PRJNA340009_P_NODE_42756_length_195_cov_8.397260_g42449_i0 PRJNA340009 42756 195 8.39726 16.374657 Opisthokonta 33154 Mollusca Mollusca 46.2 0.00124   NR CAG2224203.1 6550 g42449 i0 48.4 8.07692307692308 31 16 47.7 0 13 105 706 736 CAG2224203.1 G-protein coupled receptor GRL101 [Mytilus edulis] diamond 1575 46.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
31545847 31545847 PRJNA340009_P_NODE_22536_length_256_cov_7.154589_g22229_i0 PRJNA340009 22536 256 7.154589 18.31574784 Mytilus 6548 Mollusca Mollusca 74.7 2.45e-13   NR XP_052061000.1 6549 g22229 i0 66 6.4453125 50 17 58.6 0 50 199 2 51 XP_052061000.1 uncharacterized protein LOC127701221 isoform X7 [Mytilus californianus] diamond 1650 75.1 0.994673768308922 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
31591878 31591878 PRJNA340009_P_NODE_23816_length_250_cov_6.149254_g23509_i0 PRJNA340009 23816 250 6.149254 15.373135 Magallana angulata 2784310 Mollusca Mollusca 72.4 1.31e-12   NR XP_052692741.1 2784310 g23509 i0 50.7 0.876 73 29 79.2 1 221 24 177 249 XP_052692741.1 uncharacterized protein LOC128171017 [Magallana angulata] diamond 219 72.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana angulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;