contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA340009" and tax_phylum = "Endomyxa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26965342 | 26965342 | PRJNA340009_P_NODE_8102_length_394_cov_2.020290_g7795_i0 | PRJNA340009 | 8102 | 394 | 2.02029 | 7.9599426 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 60.8 | 4.07e-8 | NR | MES1920200.1 | 126728 | g7795 | i0 | 36.6 | 4.03553299492386 | 93 | 47 | 70.1 | 3 | 110 | 385 | 9 | 90 | MES1920200.1 hypothetical protein [Bonamia ostreae] | diamond | 1590 | 60.8 | 1 | Eukaryota | Sar | Endomyxa | Ascetosporea | Haplosporida | Bonamia | Bonamia ostreae | |||
| 27218128 | 27218128 | PRJNA340009_P_NODE_64802_length_166_cov_0.871795_g64495_i0 | PRJNA340009 | 64802 | 166 | 0.871795 | 1.4471797 | Endomyxa | 2604748 | SAR_Eukaryotes | SAR_Eukaryotes | 47.4 | 3.1e-4 | NR | SPQ97808.1 | 37360 | g64495 | i0 | 46.9 | 2.58433734939759 | 49 | 26 | 88.6 | 0 | 14 | 160 | 480 | 528 | SPQ97808.1 unnamed protein product [Plasmodiophora brassicae] | diamond | 429 | 47.8 | 0.99163179916318 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae | ||
| 28008078 | 28008078 | PRJNA340009_P_NODE_34045_length_215_cov_3.307229_g33738_i0 | PRJNA340009 | 34045 | 215 | 3.307229 | 7.11054235 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 46.2 | 0.00157 | NR | CEO96305.1 | 37360 | g33738 | i0 | 56.8 | 1.54883720930233 | 37 | 16 | 51.6 | 0 | 113 | 3 | 222 | 258 | CEO96305.1 hypothetical protein PBRA_004976 [Plasmodiophora brassicae] | diamond | 333 | 46.6 | 0.991416309012876 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae | ||
| 28874673 | 28874673 | PRJNA340009_P_NODE_11668_length_340_cov_1.151203_g11361_i0 | PRJNA340009 | 11668 | 340 | 1.151203 | 3.9140902 | Plasmodiophora brassicae | 37360 | SAR_Eukaryotes | SAR_Eukaryotes | 66.6 | 4.61e-10 | NR | CEO98042.1 | 37360 | g11361 | i0 | 46.2 | 1.16470588235294 | 65 | 35 | 57.4 | 0 | 13 | 207 | 411 | 475 | CEO98042.1 hypothetical protein PBRA_006156 [Plasmodiophora brassicae] | diamond | 396 | 66.6 | 1 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae | ||
| 30011698 | 30011698 | PRJNA340009_P_NODE_79431_length_155_cov_15.905660_g79124_i0 | PRJNA340009 | 79431 | 155 | 15.90566 | 24.653773 | Plasmodiophora brassicae | 37360 | SAR_Eukaryotes | SAR_Eukaryotes | 48.1 | 1.39e-4 | NR | CEO97951.1 | 37360 | g79124 | i0 | 65.7 | 0.67741935483871 | 35 | 12 | 67.7 | 0 | 51 | 155 | 127 | 161 | CEO97951.1 hypothetical protein PBRA_006065 [Plasmodiophora brassicae] | diamond | 105 | 48.1 | 1 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;